Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03736 ATGGTGGAGAAAGCCAAGGGCAGGAAAGAGGAGGTCGTCACTCGAGAGTACACCATCAACATCCACAAACGCTTACATGGCTGCACATTTAAAAAGAAGGCTCCTAAAGCGATTAAGGAGATAAGGAAGTTTGCTCAGAAGGCGATGGGGACGAATGATGTGAGAGTGGATGTGAAGCTCAACAAGTATGTTTGGAGTCAGGGGATACGGAGTGTTCCCAGGAGGATTAGGGTTCGCATTGCTCGCAAGAGGAATGATGATGAGGATGCCAAAGAGGAGCTATACTCTCTTGTTACCGTCGTGGAGATTTCTAAGGAGGAGCTCAAAGGTTTGAACACTAAGGTTATAGAGGATGAGGATTGA 363 0.4683 MVEKAKGRKEEVVTREYTINIHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKYVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEISKEELKGLNTKVIEDED* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03736 120 PANTHER 60S RIBOSOMAL PROTEIN L31 2 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lapu3g03736 120 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Lapu3g03736 120 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Lapu3g03736 120 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lapu3g03736 120 FunFam 60S ribosomal protein L31 6 119 - -
Lapu3g03736 120 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lapu3g03736 120 Gene3D - 9 120 IPR023621 -
Lapu3g03736 120 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03736 Lapu-Chr3 60815426 60817920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03736 2 120 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 79.832 1.43e-66 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03736 K02910 - gmx:100305583 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03736 3 60815426 60817920 Lapu3g03736 3 60815426 60817920 ECH