Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03732 ATGTCCTCTAATCCAATAATACTGCAGAGTGAAAAGCTGAGCAAGTATATACTGGAGACTAGCGTTTACCCACGAGAAGCAGAGACTCTCAAAGAGCTAAGGAATGCCACTGCAACCCACCCTTGGGGCTTTATGGGCGCTGATCCCGGTGCGGGTCAGCTAATGGCCTTGCTCTTGAAGGTGTTGAATGCTAAAAAGACAATTGAAGTGGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTCACCATTCCAGATGATGGAAAGATTATAGCCCTGGATCCAGATAGAGAAGCTTATGAGATAGGACTACCATTCATTAAGAAGGCTGGTGTAGAGCACAAGATCGACTTCATACAGTCTCCAGCTTTACCTGTTCTTGATAAACTCTTAGAAGACGATTCAAATAAGGAAAGTTTTGACTTTGCCTTCGTTGATGCAGATAAAGATAACTACTGGAATTACCACGAACGGCTTCTTAAACTGGTGAAGATTGGTGGTTTAATAATCTATGATAACACTCTCTGGGGTGGAACTGTTGCCTGGCCTGAAGAGGATGTTCCACTACCCAAAAGAAAATACAGGCAGGCTGCTCTAGCTTTCAACAAAGCAATTGCAGATGATTCTCGTGTTGAAATTTCTGCTGTTTCAATTGGTGATGGCTTCACCATCTGCAGGCGTGCTCATTGA 693 0.4372 MSSNPIILQSEKLSKYILETSVYPREAETLKELRNATATHPWGFMGADPGAGQLMALLLKVLNAKKTIEVGVFTGYSLLLTALTIPDDGKIIALDPDREAYEIGLPFIKKAGVEHKIDFIQSPALPVLDKLLEDDSNKESFDFAFVDADKDNYWNYHERLLKLVKIGGLIIYDNTLWGGTVAWPEEDVPLPKRKYRQAALAFNKAIADDSRVEISAVSIGDGFTICRRAH* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03732 230 Gene3D Vaccinia Virus protein VP39 2 229 IPR029063 -
Lapu3g03732 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 228 IPR029063 -
Lapu3g03732 230 CDD AdoMet_MTases 68 172 - -
Lapu3g03732 230 Pfam O-methyltransferase 19 228 IPR002935 GO:0008171
Lapu3g03732 230 PANTHER O-METHYLTRANSFERASE-RELATED 4 229 - -
Lapu3g03732 230 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 6 229 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03732 Lapu-Chr3 60797384 60798709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03732 7 230 Monolignol Biosynthesis Gene Families AT4G26220 63.839 4.80e-107 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03732 K00588 - gmx:100780516 432.18