Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu3g03723 | ATGGGGAGGAAGTGCTCACATTGTGGAGTTATAGGTCATAATTCAAGGACCTGCACATCTTTGAGAGGCTCTACTTTCGTTGGACTTCGCCTCTTTGGCGTGCAATTAGACACTTGTGTTACCATCAAGAAAAGCTTCAGCATGGACTCCTTACCCTCTTCATCATCTTCATCATTTTCTTCTTCAAGAATAACCATTGATGAAAATTCTGACCGAACCTCTTTTGGGTATCTATCAGATGGTCTCATAGGTCGAGTCCAAGAGAGGAAGAAAGGAGTGCCATGGACAGAAGAGGAACACAGAATATTCCTTGTTGGACTTGAGAAGCTGGGAAAGGGTGATTGGAGGGGAATCTCAAGAAACTTTGTGACCACAAGAACTCCAACACAAGTGGCAAGCCATGCGCAGAAGTACTTTCTTAGATTGGCAACTATAGATAAGAAGAAGCGACGTTCTAGTCTCTTTGACTTGGTTGGTAGCAACAACCCCAGCATAGCAGGTTGTAATTCAGTTTCAGCTTATCATCAAAATGATGAGTCCAAATGTGAAGTTAAGAATAATGATGCCACTTTGTCGTTGCTAGGGCGTATAACCTACTTTCAACAAGAAACCAAATCAGATTATAATAAGCAAGAAAATCTTGATAATTTCCCTCATCAAGTTCCTAATCTGGACCTCACTCTCCATTCCTGCTTGGGCCAATTAGTGTGA | 711 | 0.4191 | MGRKCSHCGVIGHNSRTCTSLRGSTFVGLRLFGVQLDTCVTIKKSFSMDSLPSSSSSSFSSSRITIDENSDRTSFGYLSDGLIGRVQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATIDKKKRRSSLFDLVGSNNPSIAGCNSVSAYHQNDESKCEVKNNDATLSLLGRITYFQQETKSDYNKQENLDNFPHQVPNLDLTLHSCLGQLV* | 237 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu3g03723 | 236 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 87 | 143 | IPR017930 | - | |
Lapu3g03723 | 236 | FunFam | transcription factor MYB1R1 | 93 | 144 | - | - | |
Lapu3g03723 | 236 | SMART | sant | 91 | 141 | IPR001005 | - | |
Lapu3g03723 | 236 | ProSiteProfiles | SANT domain profile. | 95 | 143 | IPR017884 | - | |
Lapu3g03723 | 236 | Pfam | Myb-like DNA-binding domain | 94 | 139 | IPR001005 | - | |
Lapu3g03723 | 236 | CDD | SANT | 94 | 139 | IPR001005 | - | |
Lapu3g03723 | 236 | ProSiteProfiles | Myb-like domain profile. | 87 | 139 | IPR001005 | - | |
Lapu3g03723 | 236 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 3 | 188 | - | - | |
Lapu3g03723 | 236 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 90 | 141 | IPR006447 | GO:0003677 | |
Lapu3g03723 | 236 | SUPERFAMILY | Homeodomain-like | 88 | 143 | IPR009057 | - | |
Lapu3g03723 | 236 | Gene3D | - | 93 | 145 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu3g03723 | Lapu-Chr3 | 60710267 | 60711893 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Lapu3g03723 | Myb_DNA-binding | 1.9e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu3g03723 | - | - | gmx:778093 | 359.377 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lapu3g03723 | 3 | 60710267 | 60711893 | Lapu3g03723 | 3 | 60710267 | 60711893 | ECH |