Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03716 ATGGCGGGTGCTATGAATAAGAAGGTCGACAAGATTCGCCAAATCGTCCGTCTCAAGCACCTCATGTCACGCTGGAAGCAAATCAGCCTCCGCCGCCGCTCCGATGACACTTCCTCCACGCGCCGCCCTCCCTCCGGCTTCACCTTCGTCTACGTCGGCCCTGACCGAACGCGCTTTGCCATCCCCGCGCGTTTCCTCAACCTCCCCGTCTTCGAAGGCCTCCTCAAACAAACCGAGGAGCAGTTCGGACTCCGAGGTAACGGCGGTTTGGTCCTCCCCTGTCAAGTGCCCTTCTTCTCTAACGTCGTTAAGTTTCTCCACAAGGACGAACACAAGTACGGAAAACTCTCTCTCCAAGACTTCCTCAACTTGGTCTCCGATGCTGACGTTTCCGATTCCTGTAAGGAAAACGTCGTCGTTTTCACCCCTCTGCTGCAGAAAGCAGAGGTTTGA 453 0.5585 MAGAMNKKVDKIRQIVRLKHLMSRWKQISLRRRSDDTSSTRRPPSGFTFVYVGPDRTRFAIPARFLNLPVFEGLLKQTEEQFGLRGNGGLVLPCQVPFFSNVVKFLHKDEHKYGKLSLQDFLNLVSDADVSDSCKENVVVFTPLLQKAEV* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03716 150 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 32 101 IPR003676 GO:0009733
Lapu3g03716 150 Pfam Auxin responsive protein 17 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03716 Lapu-Chr3 60618615 60619067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03716 8 120 Calmodulin-binding Proteins AT3G43120 28.859 6.35e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03716 K14488 - gmx:100797463 243.817