Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03707 ATGTCAAGGTTTGTTCAGGAGAAGAAGATGGGTGCAGGACGTGTGGTGGCTGTGGCAATTGAAAATAACAAAACAAGCCAATATGCAGCAAAATGGGCAGTTGACAATCTTCTTCCCAAAGAACAAACTCTATTATTGGTCCATGTTAGACAAAGAGTATCTTCCATTCCTTCACCAACGGGAAATCTTATACCCCTTGATGGCAACGATGATGTGGCTAGAGCATACATGCAGCAAATGGACAATGAATCTAAAGAACTTTTCGCTTCATTTCGTGTCTTCTGCAATAGAAAGAGTATACAATGCAAAGAGGTGTTACTGGAGGACATGGATATAAGTAAGGGATTAATAGAAGGTATTTCTAAGTATTCCATCGAGCTTCTGGCACTCGGGGCACCTTCAAGGAGTGGTCTTGTTAGAAGATTCAGGACATCGGATATTCCAAATTGTGTGTCGAAAGGGGCACCACCATTTTGCACTGTCTACATTATTTCCAAAGGAAAAATCTCATCGGTGAAAACAGCTACTGCTCCACTAACTAAGCCTCCAACACGTAACAATACACTGCAGTCGCAGCAGTCTCTCCAAACTTATGAGAGAATAGATCGACAACTAACACGCAATCCTGCCCTAACACGACCATCAATGGAGAAGTCATCACACCTTATCCGCCAGCTAACAGCAGATGAAGAGGACATCATATCACCATTCACAAGACCTGGTAGAGGAAATTATAGATCATATGAGTCCTCAATCGCTGATTCTGATATCTCATTCGTGAGTAGTGGAAGGCCTAGTGTTGATAGGATGTTCCCTTCACTGTATGATGATATGGACTCTGGCAGGTTTTCAACAGGCTCAGATTTTGATATCAGAAGTTATGGTTCTTCATTCTCAGGTGCCAAATCAATTGATCATGGTGACTTCTCATTCATGGAAGCTGAAATGAGAAGACTGAAGCTAGAACTGAAGCAGACAATGGACATGTACAGTACTGCATGCAAGGAAGCTATGACAGCTAAGCAAAAGGCACTAGAACTTCAGCGTTGGAAAGTGGAAGAACAAAGGAAAGTGGAAGAAGCGCGATTAGCTGAAGAAAATGCATTGGTAGTGGCTGAAAAGGAGAAAGCAAAATGTATAGCTGCCATGGAAGCAGCAGAAACATCTCAAAAAATTGCAGAGTTAGAAGCACAAAAGAGAATGAGTATAGAATCTGAGCATAAGAAGACTGCAGATATCTTTTCACACAGTCCTGACAGGTACAGAAAATACACTATAGAGGAGATAGAAGAGGCAACAAAGTTCTTTTCCAACTCTCTCAAGGTCGGTGAAGGTGGTTATGGGCCAGTCTACAGGTGTGAACTGGATCACACGCCAGTTGCAGTGAAGGTATTGAAACCAGATGCAGCTCAGGGACGTTCACAGTTTCACCAGGAGATTGAAGTGCTAAGTAGCATAAGGCATCCAAACATGGTTCTCCTCCTTGGAGCATGTCCTGAGTTTGGCTGCTTGGTGTATGAGTATATGGCTAATGGAAGTTTAGATGATTGCCTCTTCCGGAGAGGCAACAAAAAAGCTCTTCCCTGGCAGCTGAGATTCCGAATTGCTGCAGAGATTGCAACTGGGCTCCTTTTCCTACACCAGACAAAGCCAGAGCCACTTGTGCATCGTGACTTGAAACCTGCAAACATTTTGCTTGACCGTAACTTTGTGAGCAAGATCAGTGATGTGGGATTGGCCAGGCTTGTTCCGCCTTCAGTTGCAGACACCGCCACACAGTATCACATGACATCAACTGCTGGAACTTTCTGTTACATTGACCCCGAGTATCAGCAAACGGGCATGCTGGGAATCAAATCTGATATTTACTCACTGGGGATCATGCTTCTGCAGATAATAACAGCAAAACCACCAATGGGTTTGACTCACCTTGTTGAGGGAGCTATTGAGACGGGGACTTTTGCCGAGATGCTTGACCCAGCCGTTGAGGACTGGCCAGTTGAACACGCCTTGCATTTTGCCAAGCTTTCCTTGGCGTGTGCAGAAATGAGAAGAAAAGATAGACCTGATCTTGGAAAAGTTGTATTGCCCGAGCTCAATAAACTCAGAGATTTTGCTGAAGATAACATGCCCATGATGATGACCTTCGGCGTTCCCACGGTATTCGCTCCCAGAAGCAACTATAGTTACTCAAACTCCTCCTTCTCCTCAGCTCAAGTGAGTCACCGTCGTTAG 2235 0.443 MSRFVQEKKMGAGRVVAVAIENNKTSQYAAKWAVDNLLPKEQTLLLVHVRQRVSSIPSPTGNLIPLDGNDDVARAYMQQMDNESKELFASFRVFCNRKSIQCKEVLLEDMDISKGLIEGISKYSIELLALGAPSRSGLVRRFRTSDIPNCVSKGAPPFCTVYIISKGKISSVKTATAPLTKPPTRNNTLQSQQSLQTYERIDRQLTRNPALTRPSMEKSSHLIRQLTADEEDIISPFTRPGRGNYRSYESSIADSDISFVSSGRPSVDRMFPSLYDDMDSGRFSTGSDFDIRSYGSSFSGAKSIDHGDFSFMEAEMRRLKLELKQTMDMYSTACKEAMTAKQKALELQRWKVEEQRKVEEARLAEENALVVAEKEKAKCIAAMEAAETSQKIAELEAQKRMSIESEHKKTADIFSHSPDRYRKYTIEEIEEATKFFSNSLKVGEGGYGPVYRCELDHTPVAVKVLKPDAAQGRSQFHQEIEVLSSIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKKALPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADTATQYHMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQIITAKPPMGLTHLVEGAIETGTFAEMLDPAVEDWPVEHALHFAKLSLACAEMRRKDRPDLGKVVLPELNKLRDFAEDNMPMMMTFGVPTVFAPRSNYSYSNSSFSSAQVSHRR* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03707 744 CDD STK_N 15 167 - -
Lapu3g03707 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Lapu3g03707 744 Gene3D HUPs 14 163 IPR014729 -
Lapu3g03707 744 Gene3D Transferase(Phosphotransferase) domain 1 509 714 - -
Lapu3g03707 744 PANTHER OS02G0152300 PROTEIN 15 712 - -
Lapu3g03707 744 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 408 508 - -
Lapu3g03707 744 FunFam U-box domain-containing protein 51 509 709 - -
Lapu3g03707 744 Pfam Protein kinase domain 439 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03707 744 Gene3D Phosphorylase Kinase; domain 1 415 508 - -
Lapu3g03707 744 SUPERFAMILY Protein kinase-like (PK-like) 416 695 IPR011009 -
Lapu3g03707 744 SMART serkin_6 436 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03707 744 ProSiteProfiles Protein kinase domain profile. 436 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03707 744 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03707 Lapu-Chr3 60519348 60523268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03707 16 718 Receptor kinase-like Gene Family AT5G35380 57.202 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lapu3g03707 Pkinase 1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03707 - - gmx:100803837 1260.36