Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03706 ATGGCACTAAGTGGCAGGCGTTGCTGGATCATCTTCATCGTTTTCCTAGCACCTCTCTTTCTTCTCTCTTCTGCCGCTTCTGACTTTGAATTGCTCCTCCAACTCAAAGATAACTTGGAAAACTATGGTTCCGCCTTGGACTCATGGAACACTACCACTCCTCCTTGCAACGTTGGCCATGCCAACTGGCATGGCATTCTCTGCTACGAAGGAAAAGTGTGGGGCGTCAAGCTTGAGAACATGGGCCTCAAAGGGGTCATAGACATAGAAGCTCTCCAGGGCTTGCCTTACCTAAGAACCTTGAGTTTCATGAACAATAATCTCGAGGGCTCGTGGCCCGAAATTCAACACTTGATTGGTCTCAAATCTATTTACCTTTCCAATAACAAGTTTTCTGGTGAGATTCCTTATAGAGCCTTCGAGGGGTTGCAGTGGTTGAAGAAAGTTCATCTGTCGAACAACAAATTCTCGGGTTCTGTTCCAACTTCGCTGACGGTGTTGCCCAGGCTCATAGAACTGAGGTTGGATGGGAATGAGTTCACTGGGCCCATTCCCCATTTTCATCACCTGAACAGATTGAGATCGTTTAGTGTTGCCAATAATCAGTTGCAGGGTCAGATTCCTTCCACCATTAGCAGAATGCCGATTTCTTCCTTTGCTGGTAATGAAAGGTTATGTGGAACCCCATTGGAGTCCTGCACCGCGAAGTCCTCCACTGCTAGCATCATTGTGGCAGTGGTGGTTGTTTGCGTGGCAGTGCTTGTGATTGGAGCAGTAGGGTTAATCATTCACAGAAGAAAGAACCGAGAGTCTGCGACGGGCGTCGAGAATCCACCCAGTGGTCACGGCAAAGGGCGTCTGAGGGACATGAGTGATGAGGATGACAGAGAAAGGTTTGACCTGCAAGAGTTGCTGAGAGCCTCTGCTGAGATTTTGGGAAGTGGCTGCTTCAGCTCTTCATACAAGGCAGCTTTGATGAATGGGCCAACAATAGTGGTGAAGAGGTTCAAGCAGATGAACAACGTGGGGAAGGAAGAGTTCCAAGAGCACATGAGGAGGTTAGGGAGGTTGTCCCATCCTAATTTGCTTCCCCCAGTGGCTTACTATTACAGAAAGGAAGAGAAGCTCTTGGTCACAGACTATGTTCAGAATGGCAGTCTCGCTGTTCGCCTTCATGGGCACCAATCCCTGGGAGAACCAAGCCTTGAGTGGCCAATCCGGTTGAAGATTGTGAAAGGCATAGCAAAAGGTCTTGAATATCTATACAGGGACATGCCAAGCCTAATTGCTCCACATGGCAATCTCAAGTCCTCCAATGTTCTCTTGACTGAATCTTTTGAGCCTCTCCTCACAGACTATGGCCTGGTCCCAGTGATAAACCAGGAACTGGCTCAGGACATTATTGTGATATACAAGTCTCCAGAATATCTGCAACAAGGAAGGATTACAAAGAAGACTGATGTGTGGTGTCTTGGAATACTGATTCTGGAGATCCTAACTGGGAAGTTCCCTGCAAACTTTTTGCAAAAGGGTAAAGGGAGTGAGGTGAGTTTGGCAAGTTGGGTGGATTCAGTTGTGCCAGAAGAGTGGACCAATGCTGTGTTTGATCAAGAAATGGGGGCAACAGAGAACAGTGAAGGAGAGATGGGGAAGCTTTTGAAGATTGCCTTGAACTGTTGTGAAGGGGATGTGGATAAGAGGTGGGATTTAAAGGAAGCAGTGGAGAAAATCCATGAGGTGAAGCAGAGGGATGATGATCAAGAGAATTTTTTTACTTCTTATGCTAGTGAAGCAGACATGAAGTCTTCAACT 1812 0.4713 MALSGRRCWIIFIVFLAPLFLLSSAASDFELLLQLKDNLENYGSALDSWNTTTPPCNVGHANWHGILCYEGKVWGVKLENMGLKGVIDIEALQGLPYLRTLSFMNNNLEGSWPEIQHLIGLKSIYLSNNKFSGEIPYRAFEGLQWLKKVHLSNNKFSGSVPTSLTVLPRLIELRLDGNEFTGPIPHFHHLNRLRSFSVANNQLQGQIPSTISRMPISSFAGNERLCGTPLESCTAKSSTASIIVAVVVVCVAVLVIGAVGLIIHRRKNRESATGVENPPSGHGKGRLRDMSDEDDRERFDLQELLRASAEILGSGCFSSSYKAALMNGPTIVVKRFKQMNNVGKEEFQEHMRRLGRLSHPNLLPPVAYYYRKEEKLLVTDYVQNGSLAVRLHGHQSLGEPSLEWPIRLKIVKGIAKGLEYLYRDMPSLIAPHGNLKSSNVLLTESFEPLLTDYGLVPVINQELAQDIIVIYKSPEYLQQGRITKKTDVWCLGILILEILTGKFPANFLQKGKGSEVSLASWVDSVVPEEWTNAVFDQEMGATENSEGEMGKLLKIALNCCEGDVDKRWDLKEAVEKIHEVKQRDDDQENFFTSYASEADMKSST 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03706 604 ProSiteProfiles Protein kinase domain profile. 306 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03706 604 Gene3D Transferase(Phosphotransferase) domain 1 382 600 - -
Lapu3g03706 604 Pfam Protein tyrosine and serine/threonine kinase 310 576 IPR001245 GO:0004672|GO:0006468
Lapu3g03706 604 Gene3D Phosphorylase Kinase; domain 1 285 381 - -
Lapu3g03706 604 Pfam Leucine rich repeat N-terminal domain 26 68 IPR013210 -
Lapu3g03706 604 Gene3D Ribonuclease Inhibitor 188 233 IPR032675 -
Lapu3g03706 604 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 585 IPR046959 -
Lapu3g03706 604 MobiDBLite consensus disorder prediction 269 293 - -
Lapu3g03706 604 Gene3D Ribonuclease Inhibitor 27 186 IPR032675 -
Lapu3g03706 604 FunFam Pollen receptor-like kinase 1 382 591 - -
Lapu3g03706 604 SUPERFAMILY Protein kinase-like (PK-like) 310 582 IPR011009 -
Lapu3g03706 604 SUPERFAMILY L domain-like 27 214 - -
Lapu3g03706 604 FunFam Nuclear pore complex protein NUP107 25 186 - -
Lapu3g03706 604 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03706 Lapu-Chr3 60513460 60516425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03706 8 603 Receptor kinase-like Gene Family AT5G35390 52.074 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu3g03706 PK_Tyr_Ser-Thr 3.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03706 - - gmx:100804368 976.081