Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03676 ATGGACGATACTGAAACAAAACAACGAATCGAGGAAACAGTTCGCAGGATTTTGCAAGAGTCCGACATGGACGAGGTTACGGAGTCTAAGATTCGAAAGCAGGCCTCCGAGCAACTCGGTCTCAACCTCTCTCAGCCCCATTTCAAAGCCTTCGTGAAGCAGGTCGTGGGGGCTTTTCTCCAAGAAAAGTTACAAGAGCAAGAAGAACAACAGCTACAACAAGAAGAAAATGATGAGGAAGAAGTTGAAGAAGAGCAAGGAGTTTCCAAGGGCAAGGAGTACGATGATGAAGGCGATCTCATCATCTGCAAGCTTTCAGAGAAGAGAAGGGTGACCATTCAGGATTTTAGAGGGAAAACTTTGGTCTCCATCCGCGAGTATTATAAAAAAGATGGCAAGGAACTTCCTACCTCCAAAGGAATAAGTTTGACCGAGGAGCAGTGGTCTGCCTTTAAAAAGAATCTGCCTGCCATAGAAAAAGCCATTAAGAAAATGGAGTCTCGTTGA 507 0.4497 MDDTETKQRIEETVRRILQESDMDEVTESKIRKQASEQLGLNLSQPHFKAFVKQVVGAFLQEKLQEQEEQQLQQEENDEEEVEEEQGVSKGKEYDDEGDLIICKLSEKRRVTIQDFRGKTLVSIREYYKKDGKELPTSKGISLTEEQWSAFKKNLPAIEKAIKKMESR* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03676 168 MobiDBLite consensus disorder prediction 66 93 - -
Lapu3g03676 168 Pfam DEK C terminal domain 5 60 IPR014876 -
Lapu3g03676 168 SUPERFAMILY ssDNA-binding transcriptional regulator domain 102 164 IPR009044 GO:0003677|GO:0006355
Lapu3g03676 168 PIRSF RNA_polymII_KELP 1 168 IPR017415 -
Lapu3g03676 168 MobiDBLite consensus disorder prediction 1 29 - -
Lapu3g03676 168 Gene3D Transcriptional Coactivator Pc4; Chain A 91 168 IPR009044 GO:0003677|GO:0006355
Lapu3g03676 168 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 4 61 IPR014876 -
Lapu3g03676 168 Pfam Transcriptional Coactivator p15 (PC4) 103 154 IPR003173 GO:0003677|GO:0006355
Lapu3g03676 168 SUPERFAMILY DEK C-terminal domain 3 60 - -
Lapu3g03676 168 Coils Coil 57 85 - -
Lapu3g03676 168 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 167 IPR045125 GO:0003713|GO:0060261
Lapu3g03676 168 Gene3D - 2 63 - -
Lapu3g03676 168 FunFam RNA polymerase II transcriptional coactivator KELP 92 168 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lapu3g03676 DEK_C 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03676 K25815 - gmx:100305633 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03676 3 60232379 60234720 Lapu3g03676 3 60232379 60234720 ECH