Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03656 ATGGAGAGTGAATTGAGCTGGGAGCAGAACACACTAGTCAATGAGCTAATTCAGGGGATGGAGCTAGCAAGGAAGCTGAAGGAAGACTTAAGGATGCCGTTTTCAGTTGACTCAAGAGATATGCTGGTGCAGAGGATATTATCTTCTTATGAAAAGGCTCTACTGATTCTAAGATGCAATGCATCAACTTCCGAGTTGCAGGCCACGAGTCAAGCAACAGCAACTATGTTACCAGAGTCGCCATTATCCGTCCATGGAAGTCCCCTGAGTGAGGATGCTGATGGGGCCGTAAAGGATCACCAAGAAATTAAACATGATTCAAAGAAAAGAAAGATAACGCCTAAATGGATGGATCATGTAAGAGTGAGCTGTGAGAGTGGTCTTGAAGGACCACAAGAAGATGGCTACAACTGGAGAAAATACGGTCAGAAAGACATCCTCGGAGCCAAATATCCTAGAAGTTACTATAGGTGCACCTTCCGCAACACACAGGGCTGTTGGGCCACGAAGCAAGTGCAGAGATCAGATGAAGATCCCACAATATTTGACATAACCTACAGAGGAAAGCATACCTGTTCTCAGGGAAACAACGCCGTTTTGCCACCTAAGTCACCAGACAAACAAGAGAAGACGCACAGTCATTGCATTGCCATTCACCATGCACAGGCATCACAAGAAAGCCTTACAAAGTTCAGAAACATCTTGTCTGTCAACACAGATAAACTAGACAATGGAGATATGGCATATCCTTTCACTTTCCCTTCGACTTCATCAGCATGCATGAAACAATACAACCACAGCTTGATTCCGTTGACCCTAGAGAATGAGTACTTCTTGAGAGACCAATACCAAACACACCTGTTATCTCCAACAACCCCAGAATCAAACTATTTCCCATCTCCAACTTTCCAGATGAATGAGTTTGATGGAATCTACAACAAGCCTTATTCAGAATCAGATATTAATGAGATCATTTCCACCAACACATCAGCAACCAATTCTCCAATTCCAGATTTCAATTTCTCACTTGATCCAGTGGAAATTGACCCGAATTTTCCTTTCAATACCCCAGGATTTTTCTCCTGA 1086 0.4319 MESELSWEQNTLVNELIQGMELARKLKEDLRMPFSVDSRDMLVQRILSSYEKALLILRCNASTSELQATSQATATMLPESPLSVHGSPLSEDADGAVKDHQEIKHDSKKRKITPKWMDHVRVSCESGLEGPQEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYRGKHTCSQGNNAVLPPKSPDKQEKTHSHCIAIHHAQASQESLTKFRNILSVNTDKLDNGDMAYPFTFPSTSSACMKQYNHSLIPLTLENEYFLRDQYQTHLLSPTTPESNYFPSPTFQMNEFDGIYNKPYSESDINEIISTNTSATNSPIPDFNFSLDPVEIDPNFPFNTPGFFS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03656 361 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g03656 361 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03656 361 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03656 361 FunFam WRKY transcription factor 53 118 195 - -
Lapu3g03656 361 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03656 361 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 277 IPR044810 GO:0003700
Lapu3g03656 361 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03656 Lapu-Chr3 59999044 60000886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03656 5 256 WRKY Transcription Factor Family AT4G23810 46.182 1.13e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu3g03656 WRKY 8.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03656 - - gmx:100815760 663.685