Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03641 ATGGACTTTCTACCCATTTTCTCTTCCATTTCCCTTTTGTGTTTGGTTCTGTGGCAAGGAAGTGGTGAGCCTGTTGAAGATAAGGAGGCGTTGCTTGACTTTGTGAACAAGTTCCCTCCTTCTAGGCCTCTGAATTGGAATGAGAGTTCCCCCTTGTGTGCTTCTTGGACTGGTGTGACTTGCAATGAAGACAAGTCCAGAGTAATTGCAATTAGGTTGCCGGGGGTTGGATTTCATGGCACTATTCCACCTGACACTATTAGCCGCCTCTCAGCACTGCAAACTTTGAGCCTCAGATCCAATGTGATATCTGGGCATTTCCCTTCTGATTTTTCCAATCTAAAAAACTTGTCTTTCCTCTACCTTCAGTTCAACAACTTGTCTGGGCCTTTGCCTGATTTCTCGGCCTGGAAGAACCTCACTGTTGTCAATTTGTCCAATAACCATTTCAATGGCAGCATTCCTGTCTCCCTTAACATCTTGCCGCAGCTTTCTGGTTTGAACCTTGCAAACAACTCTCTTTCTGGGGAAATTCCTGACCTTAACATGTCAAGATTGCAGGCGCTGAATCTGTCCAACAACAATTTTTCGGGAACTGTGCCTAAATCTTTGTTGAGGTTTCCTGAGTCTGCATTCTCTGGGAATAACATTTCCTTTGGAAGTTTTCCCACAGTTTCTCCGGCACCCCAACCAGCTTATAGGCCGTCTTTGAAGTCTAGGGGGCGTAGAAGGCTCAGTGAAGCGGCGCTGTTGGGAGTGGTTGTTGCTGCTGGTGTTTTAGGCCTCGTGGCTTTTGTTTCTTTGACTTTTGTGTGCTGCTCAAGAAGAGGTGACGAGGATGAGGAAACCTTCAGCGGGAAGTTGCACAAGGGAGAAATGTCTCCTGAGAAAGCAGTCTCAAGGAACCAGGATGCAAATAATAAGCTAGTTTTCTTTGAGGGATGCAATTATGCCTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAAGTGCTGGGAAAGGGAACGTTTGGAACTGCCTACAAGGCAATACTAGAAGATGCAACCACGGTTGTTGTGAAGAGGTTAAAGGAGGTAGCTGTTGGAAAGAAGGATTTTGAGCAGCACATGGAGATCGTTGGAAGTCTTAAGCATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAGAAACTCATGGTATATGATTACCACAGTCAGGGGAGCATAGCTTCCATTTTGCATGCCAAGAGAGGAGAGGAGAGGGTGCCTTTAGATTGGGATACAAGGCTGAAAATAGCCTTAGGTGCGGCAAGAGGCATTGCTCGTATCCATGTTGAGAATGGTGGCAAGCTTGTACATGGCAACATCAAATCCTCAAACATCTTTCTCAACTCCAAACAGTATGGATGTGTGTCTGACCTTGGCCTGGCAACCATATCAAGCTCACTTGCCTTACCAATATCACGAGCAGCCGGTTACCGGGCACCCGAAGTGACAGACACCAGAAAAGCAGCACAGCCCTCAGATGTTTACAGTTTTGGTGTGGTGTTGCTAGAGCTTCTGACTGGGAAATCCCCTATACACACGACTGGTGGTGATGAGATTATCCACCTTGTGAGGTGGGTTCATTCAGTTGTGCGTGAGGAGTGGACAGCCGAAGTGTTTGACCTTGAGCTGATGAGATATCCAAACATAGAAGAAGAGATGGTGGAAATGTTACAGATAGCCATGTCATGTGTTGTGAGGATGCCTGATCAGAGGCCAAAGATGTCTGAAGTTGTGAAGATGATAGAGAATGTGAGGCAGATTGATGCAGACTCTTACTCATCATCAGGGAACCAAGCTGAACAGCTTAAACTGTCTCAACGTGACAGTGGTAACTCTCCTTCCACTCCCTCCTACTTCCCAAGAGGAAGTGAATGA 1914 0.4619 MDFLPIFSSISLLCLVLWQGSGEPVEDKEALLDFVNKFPPSRPLNWNESSPLCASWTGVTCNEDKSRVIAIRLPGVGFHGTIPPDTISRLSALQTLSLRSNVISGHFPSDFSNLKNLSFLYLQFNNLSGPLPDFSAWKNLTVVNLSNNHFNGSIPVSLNILPQLSGLNLANNSLSGEIPDLNMSRLQALNLSNNNFSGTVPKSLLRFPESAFSGNNISFGSFPTVSPAPQPAYRPSLKSRGRRRLSEAALLGVVVAAGVLGLVAFVSLTFVCCSRRGDEDEETFSGKLHKGEMSPEKAVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVYDYHSQGSIASILHAKRGEERVPLDWDTRLKIALGAARGIARIHVENGGKLVHGNIKSSNIFLNSKQYGCVSDLGLATISSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDADSYSSSGNQAEQLKLSQRDSGNSPSTPSYFPRGSE* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03641 637 Gene3D Transferase(Phosphotransferase) domain 1 402 622 - -
Lapu3g03641 637 MobiDBLite consensus disorder prediction 602 637 - -
Lapu3g03641 637 ProSitePatterns Protein kinases ATP-binding region signature. 332 363 IPR017441 GO:0005524
Lapu3g03641 637 ProSiteProfiles Protein kinase domain profile. 326 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03641 637 SUPERFAMILY L domain-like 37 207 - -
Lapu3g03641 637 Gene3D Phosphorylase Kinase; domain 1 292 400 - -
Lapu3g03641 637 FunFam Probable inactive receptor kinase RLK902 24 182 - -
Lapu3g03641 637 FunFam pollen receptor-like kinase 1 295 400 - -
Lapu3g03641 637 SUPERFAMILY Protein kinase-like (PK-like) 330 594 IPR011009 -
Lapu3g03641 637 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Lapu3g03641 637 Gene3D Ribonuclease Inhibitor 136 226 IPR032675 -
Lapu3g03641 637 PANTHER OS05G0588300 PROTEIN 8 606 - -
Lapu3g03641 637 Pfam Leucine rich repeat 81 127 IPR001611 GO:0005515
Lapu3g03641 637 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Lapu3g03641 637 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 401 608 - -
Lapu3g03641 637 Pfam Protein kinase domain 329 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03641 Lapu-Chr3 59896364 59900819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03641 16 630 Receptor kinase-like Gene Family AT4G23740 64.904 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu3g03641 Pkinase 5.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03641 - - gmx:100804799 1144.8