Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03628 ATGTTGAAAAAACTATCTGGATCCATTTTGATTCTTGGTTCACGAGTTATAGATTGTGGTAATGACTATGAAGAGGTGAATGAGAAGTTTGATTCACTCTTCCCATACACCATAGAAATCAGGCCCCCAGAAGATGAGTCACATCTTGTCAGCTGGAAATCTCAACTGGAAGAGGATATGAAGATGATTCAAGTTCAGGATAACAAAAATCATATCATGGAAGTCCTTGCAGCAAATGATCTGGATTGTGATGACCTAGATTCCATATGTGTGGAAGACACAATGGTTCTTAGTAACTATATAGAAGAGATTATCGTGTCAGCAATTTCATATCATTTGATGAAAAATAAAGACCCTGAATACAGAAATGGGAAGCTCGTTATTTCTTCCAATAGCTTGTCCCATGCATTGAGTATATTCCACAAGGGGAAATCCAATAGAGGAGATACATTAAAATTAGAAGATCAAGCTGTAAAATCAGAGAAGCAAAGAGAGGAAGGAACTGATATGAAATCAGGAGCAAAGTCTGAAAATGCTGCAGCTGTAAAAAAGGCTGAAGCAGAAATATCAACTTCGGTGGGAAAGGCGGATGGTGAAAAATCAGTTCTTGCACCCAAAGCCCCTGAAGTTCCTCCTGATAATGAGTTTGAGAAGCGAATAAGGCCTGAGGTAATACCAGCAAATGAAATTGATGTCACGTTCTCTGACATTGGTGCCTTGGATGAGACCAAAGAATCCCTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCGGACCTTTTCACCGGCGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTGTTTGGGCCTCCTGGCACTGGGAAGACCATGCTAGCAAAGGCCATTGCAAAGGAGGCTGGAGCAAGTTTCATCAATGTTTCCATGTCTACCATCACTTCTAAATGGTTTGGTGAAGATGAGAAGAACGTTCGGGCTTTATTCACACTTGCAGCCAAGGTCTCCCCAACTATTATATTCGTGGATGAGGTTGATAGCATGCTTGGGCAACGTACCAGAGTTGGGGAGCATGAAGCCATGAGGAAAATAAAGAATGAATTTATGAGCCATTGGGATGGACTTTTGACAAAGCAAGGGGAGAGAATCCTTGTTCTTGCTGCGACCAATAGGCCATTTGATCTCGATGAAGCTATTATTAGGCGATTTGAAAGAAGAATCATGGTAGGACTGCCGTCTGTGGAAAACAGGGAAAAGATTTTGAAGACTCTTTTAGCAAAAGAGAAGGTGGACAACGAACTTGATTTTAAGGAACTTGCAACTATGACAGAAGGATATACTGGAAGTGATCTTAAGAACTTGTGCACAACTGCTGCTTATCGGCCTGTTAGAGAGCTAATTCAGCAAGAGAGGCTAAAGAGTCTGGATAAAAAGCAGAAAGCTGCCAAGGGACAGAATGAAGATATTATCCAAGACAGTCAAGGGCGTGGAGAACAGGAAATTGAGCAAGAAAGAGTTATTACCCTTAGGCCGTTGAATATGCAGGATTTCAGAGAGGCCAAGAATCAGGTTGCTGCAAGCTTTGCAGCAGAAGGGGCTGGAATGAGCGAGTTAAAACAGTGGAATGATCTGTACGGTGAAGGGGGTTCAAGGAAGCAACAGCAGTTGTCTTACTTTCTATGA 1659 0.4207 MLKKLSGSILILGSRVIDCGNDYEEVNEKFDSLFPYTIEIRPPEDESHLVSWKSQLEEDMKMIQVQDNKNHIMEVLAANDLDCDDLDSICVEDTMVLSNYIEEIIVSAISYHLMKNKDPEYRNGKLVISSNSLSHALSIFHKGKSNRGDTLKLEDQAVKSEKQREEGTDMKSGAKSENAAAVKKAEAEISTSVGKADGEKSVLAPKAPEVPPDNEFEKRIRPEVIPANEIDVTFSDIGALDETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLLTKQGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILKTLLAKEKVDNELDFKELATMTEGYTGSDLKNLCTTAAYRPVRELIQQERLKSLDKKQKAAKGQNEDIIQDSQGRGEQEIEQERVITLRPLNMQDFREAKNQVAASFAAEGAGMSELKQWNDLYGEGGSRKQQQLSYFL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03628 552 Pfam ATPase family associated with various cellular activities (AAA) 272 402 IPR003959 GO:0005524|GO:0016887
Lapu3g03628 552 MobiDBLite consensus disorder prediction 157 180 - -
Lapu3g03628 552 MobiDBLite consensus disorder prediction 469 493 - -
Lapu3g03628 552 Pfam AAA+ lid domain 426 463 IPR041569 -
Lapu3g03628 552 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 2 551 - -
Lapu3g03628 552 SMART AAA_5 268 405 IPR003593 GO:0016887
Lapu3g03628 552 Gene3D - 231 403 IPR027417 -
Lapu3g03628 552 Gene3D - 404 482 - -
Lapu3g03628 552 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 231 406 - -
Lapu3g03628 552 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 231 468 IPR027417 -
Lapu3g03628 552 ProSitePatterns AAA-protein family signature. 375 394 IPR003960 GO:0005524|GO:0016887
Lapu3g03628 552 MobiDBLite consensus disorder prediction 157 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03628 Lapu-Chr3 59752662 59758194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03628 232 479 Calmodulin-binding Proteins AT3G56690 38.645 1.43e-44 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03628 - - gmx:100815589 966.837