Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03620 ATGGATGAATTTGCGTGCTTGAGGGATTGGGATTTGGAGGCTATTGTGAGAGGAAGCAGTGGCGAAGCCACCACCATGGACGATCCAAATCCTGATTTTTCTTATTTCTTCTCTGACCAAGATGAGCTACTTGATAGCTTTCCAGAATTCTCAGAAACCACGAGGGTCCTTGATGATCTGGAAGAGCTTTACAAACCTTTCTACCCAGTTTTGCACCCTCTCTCACCTCACACCATCGTTACGACTTCCCTATCTATCCCCATAGAACCCCAACAAGTCAAACAACTCAAAGCATCAGAAGAGAAAGTAGTTCTACAAGGTCTGAAAGTCCCCCCAACACCTAAGTGTAAAAAAAGCAAGAAGAGCCAGAATAAGAGTGTGGTGAAGCAGGTAACGACAGCAGAAGGTCTTGACGATGCATGGGCATGGCGTAAATATGGACAGAAACCAATAAAGGGTTCTCCCTATCCAAGAAGCTACTATAGGTGCAGCAGTTCCAAAGGGTGTTTGGCGAGGAAACAGGTTGAAAGGAGCCACTTAGATCCTGCAGTTTTTTTGGTTACCTACACTGCTGAACACAGCCATCCCCACCCAACTCGAAGAAACTCTCTTGCTGGGACCACTAGGAAGAACAATTCCCTGATTCCACCTCCAACTACTCGTAACCAGAAGACAACTTGTTCCTCAAGGACACCTTTGGTGGTGCAATCCATTGAAGATGGACTTGTAACAAGTGTGCAACAAAGCATGGACTTGAAGAAAGAGGAAGATTTTCTTGAGTGGTTGGATGATAGTGCTCAATTTGGTGATGGTTGGATTCCAAGCTCAGATCTAGAGAAACTTATTGGACTTGAGTGCCAACATTTCGCACTAGATGGGGGGTTCACGGATGGTTATGCACACTCTTGA 909 0.4543 MDEFACLRDWDLEAIVRGSSGEATTMDDPNPDFSYFFSDQDELLDSFPEFSETTRVLDDLEELYKPFYPVLHPLSPHTIVTTSLSIPIEPQQVKQLKASEEKVVLQGLKVPPTPKCKKSKKSQNKSVVKQVTTAEGLDDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFLVTYTAEHSHPHPTRRNSLAGTTRKNNSLIPPPTTRNQKTTCSSRTPLVVQSIEDGLVTSVQQSMDLKKEEDFLEWLDDSAQFGDGWIPSSDLEKLIGLECQHFALDGGFTDGYAHS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03620 302 Pfam WRKY DNA -binding domain 138 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03620 302 SMART WRKY_cls 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03620 302 MobiDBLite consensus disorder prediction 200 228 - -
Lapu3g03620 302 SUPERFAMILY WRKY DNA-binding domain 131 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g03620 302 Gene3D WRKY domain 119 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g03620 302 FunFam WRKY transcription factor 22 120 191 - -
Lapu3g03620 302 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 79 229 IPR044810 GO:0003700
Lapu3g03620 302 ProSiteProfiles WRKY domain profile. 132 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03620 302 MobiDBLite consensus disorder prediction 194 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03620 Lapu-Chr3 59655490 59656787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03620 1 289 WRKY Transcription Factor Family AT4G23550 43.689 6.45e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu3g03620 WRKY 2.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03620 K13426 K13425 gmx:102663255 491.886