Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03605 ATGTCTTCTGATCTCTACTCTTATGACACCACTTTCCACACACATTCAAACTCAGACTTTCTTTCCTCTGATGGAGTTGGAGACCTTCCTTTTCTCTCCGACTCTTTTCCTTTCTTCCCCAATTCTCCCTCTGACGTAGCTCAGGACAAATCCAATTCCAATTCCAATTCCAATTCTCTCCCTTCTCTAGACCAGTTTTCCCCATCTTTTTTCTCTTTCTCCCCTCCAAGTTCCCACTTGGAAAGCCTCAGCCTTTACCATGCCAACCGCGTGCAGCAGCCTCTGTCAAATGGCCAAAACTTGGCGAACGAGTTTGGAAGTTTCTCAGCTTTTGATGGGTCTGAAGTGAAGAGTGAAGAACGCCAATTGGGTGTTGATTGTGTCTACGCTCCACAACTCCTTCCTCACAGTTACAGTGGTGCTGAGAATTTTTCCAAGTACATGCAGAGAAGCTTCAGCAGCAACTCCTTTGAAGGAAAACCTGGTTTTCTGTCACAACCTTACAGTGATACTCTTGTGGACTCTCCAAAATTTCAAAGGCATGACTTGAGTTCCCCTGAAGACACTTTCTTCAGTGGACAAATGAGAAGGGTTTGCAGCACAGGAGATTTGCAGAACATGAAGGAAAATCACATGTCTCCAACGGAGGCACCGTTGCTGGAGGAATCGAACTTCAAAGTAGGGCGTTACAGTGCGGAAGAGAGAAAAGAAAGAATCTCTAAATACAGAGCCAAGAGAACCCAGAGGAATTTCAACAAGACCATTAAGTATGCATGCCGAAAGACACTAGCAGATAATCGACCACGCATACGCGGCAGGTTCGCGCGCAACGACGAAGCCATCGACACGACCAAGACTTCATGTTCAACACGAGACGAAGATGATGTTGATTTCTGGATTGAAGAATTGCGGTTGCATGAAGAACAAGAGGATGTAACAGTGGGAGCAGAGCAATATTTAAGAAGCTATGGAGCAACTCAGTTTCAGTATGGTGGCCTTTGA 1002 0.4551 MSSDLYSYDTTFHTHSNSDFLSSDGVGDLPFLSDSFPFFPNSPSDVAQDKSNSNSNSNSLPSLDQFSPSFFSFSPPSSHLESLSLYHANRVQQPLSNGQNLANEFGSFSAFDGSEVKSEERQLGVDCVYAPQLLPHSYSGAENFSKYMQRSFSSNSFEGKPGFLSQPYSDTLVDSPKFQRHDLSSPEDTFFSGQMRRVCSTGDLQNMKENHMSPTEAPLLEESNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFARNDEAIDTTKTSCSTRDEDDVDFWIEELRLHEEQEDVTVGAEQYLRSYGATQFQYGGL* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03605 333 Pfam CCT motif 235 277 IPR010402 GO:0005515
Lapu3g03605 333 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 46 291 IPR045281 GO:0009909
Lapu3g03605 333 ProSiteProfiles CCT domain profile. 235 277 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03605 Lapu-Chr3 59472283 59474063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03605 231 279 C2C2-CO-like Transcription Factor Family AT5G57660 53.061 2.01e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu3g03605 CCT 9.8e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03605 - - gmx:102665661 454.136