Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03596 ATGGAGGCATCAACCGCTTTAATGTTCCTATCTGCTATAGCGGCCTATTTAATATGGTTCACCTTCGTCACTCGCTCCCTCAAAGGTCCACGTGTCTGGCCCCTCTTAGGCAGCCTCCCCGGTCTCATCCAACATGCCAACCGCATGCACGACTGGATCGCTGATAACCTACGCGCCTGCGGCGGCACCTACCAAACCTGCATCTGTGCCCTCCCCTTCCTCGCGCGCAAACAGTGCTTCGTCACTGTCACCTGCGACCCCAAAAACCTCGAGCACATCCTCAAGCTCCGCTTCGACAACTACCCCAAGGGCCCCACCTGGCAGTCAGCCTTCCACGATTTGCTCGGCCAGGGTATCTTCAACTCCGACGGTGACACCTGGCTCTTCCAGCGTAAAACTGCAGCCCTGGAATTCACCACGCGCACGCTGCGTCAAGCCATGGCGCGTTGGGTCAACCGCGCCATTAAGCACAGGTTCTGCCCCATCCTAGCCACAGCTCAACTAGAAAACAAATCAGTGGACCTCCAGGACCTCTTGCTTCGGCTCACTTTCGACAACATATGCGGCTTGGCTTTCGGGCAGGACCCTCAGACACTAGCCCTGGGACTCCCAGATAACGCTTTCGCTATTTCCTTTGACAGTGCCACCGAAGCCACTCTGCAACGCTTCATTCTGCCAGAGATTATCTGGAAGCTCAAGCGATGGCTTCGTCTCGGAATGGAAGTGAGCCTAAGCCGAAGCCTCAAACACATTGACCAGTACCTCTCCAGCATCATCAAGAACCGCAAACTCGAACTCCTCAACGGCACTGGGTCCCACCATGACGACCTCTTGTCACGTTTCATGAGAAAAAAGGAAAGCTATTCAGACGAGTTTCTCCAACACGTGGCACTCAACTTCATCCTCGCTGGACGTGACACGTCATCTGTTGCCCTCAGCTGGTTCTTCTGGCTCTGCATCAAGAACCCGCGTGTGGAGGAAAACATCCTTCGTGAACTCTGCACCGTTCTGCTCTCCACGCGTGGAGAAGACATTTCCACGTGGTTGGAAGAACCTCTGGTGTTTGACGAGGTTGATCGTCTTGTCTATCTCAAAGCAGCCTTGTCCGAGACGCTACGACTTTACCCTTCTGTCCCTGAAGACTCCAAACATGTGGTTCATGACGATGTTCTCCCCAACGGGACTTTTGTTCCCGCAGGTTCCGCAGTCACGTATTCCATTTATTCCGTTGGGAGGATGAAGTTCATATGGGGAGAGGATTGCCTCGAGTTCAAGCCAGAGCGGTGGCTCTCTGCCGAAGGGGACAGAATTCAGCTTCAAGACTCTTACAAGTTTGTTTCTTTTAATGCGGGACCCAGACTTTGTTTGGGGAAGGACCTGGCCTACTTGCAGATGAAGTCCATCGCGGCTGCAGTGCTGCTGCGCCACCGCCTCACTGTCGCGGCAGGCCACCGTGTCGAGCAAAAGATGTCGCTCACGCTCTTCATGAAGTACGGTCTGAAGGTGAACTTGTGCCCTAGGGATCTGAAACCGGTACTGGAAAAGATATCAAGGACTGAGGGTGTTAATGTGGGTCAAAAGTGA 1584 0.5385 MEASTALMFLSAIAAYLIWFTFVTRSLKGPRVWPLLGSLPGLIQHANRMHDWIADNLRACGGTYQTCICALPFLARKQCFVTVTCDPKNLEHILKLRFDNYPKGPTWQSAFHDLLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVNRAIKHRFCPILATAQLENKSVDLQDLLLRLTFDNICGLAFGQDPQTLALGLPDNAFAISFDSATEATLQRFILPEIIWKLKRWLRLGMEVSLSRSLKHIDQYLSSIIKNRKLELLNGTGSHHDDLLSRFMRKKESYSDEFLQHVALNFILAGRDTSSVALSWFFWLCIKNPRVEENILRELCTVLLSTRGEDISTWLEEPLVFDEVDRLVYLKAALSETLRLYPSVPEDSKHVVHDDVLPNGTFVPAGSAVTYSIYSVGRMKFIWGEDCLEFKPERWLSAEGDRIQLQDSYKFVSFNAGPRLCLGKDLAYLQMKSIAAAVLLRHRLTVAAGHRVEQKMSLTLFMKYGLKVNLCPRDLKPVLEKISRTEGVNVGQK* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03596 527 Gene3D Cytochrome P450 19 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03596 527 CDD CYP86A 67 500 - -
Lapu3g03596 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Lapu3g03596 527 Pfam Cytochrome P450 28 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03596 527 PANTHER CYTOCHROME P450 19 502 - -
Lapu3g03596 527 FunFam Cytochrome P450 21 510 - -
Lapu3g03596 527 SUPERFAMILY Cytochrome P450 20 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03596 527 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03596 527 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03596 527 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03596 527 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03596 527 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03596 527 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03596 527 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03596 527 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03596 527 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03596 Lapu-Chr3 59350478 59352729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03596 1 512 Cytochrome P450 AT2G45970 75.922 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03596 K15398 K20544 gmx:100792719 1002.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03596 3 59350478 59352729 Lapu3g03596 3 59350478 59352729 ECH