Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03586 ATGTCTGGATGCAATAAATCACCCAAAAGTGATCGACCGTCAATCAAATATTGGCGGATTCAACATGGAGGAGCATCCTTTGAGGCTGATCTTTCTTGTGTAGATTATTCGCCTTCTCTTTCAAACAACGAGAATAAGCATCGGTATGTAAGTTGTCAACCGAAGTCCCCTCAGATACTGAGCACGGCTCAGCTCATCTCTGCAATAGGCCAGGTATGCGATTCTGCAAGTCAATCACTTTCGGTTTTACTACCAAAGGAAAATTTGAATCAGGATGATAACGGATTCCCAAAAGAGAAAATTCTGGATAGCATTGGAGTGAGAAAGAATGACCTGGTATATACTTCAAATGGCACTAAATTCTATCCTCTTACCGCGGGTGCTGCAAAGATTGTGCGGGAAAGATTGGATTTCCCTAAGGTAATGCAGAAGATATTAGTATTTGAATCTCCTAATGAAAGTCAAGATTATATCCATTCTTTATTCCAGATGTTTTCAAAGGCTAGTGATAAAATTACAGATAAAGATTGTAAAAAAATGGAACTTGGGAGGGAGGAAATGTCATTTAAATCTGGAAATGTATATTGGTGGGCAGGTAGGAATGCTTCTAAGATGCTAAGTTGTCAAGTGAACGTTACCCAGCCCGAGAACCTGGAAAGTAATTCTCCAGTTGCTGGCGGTGGCATTTCCTTAGATACAAGCACCCCTGTATTGGCTAACGAGGAGAAGGATGTGTGCAGTCCTGATTCAATCACACACCAAACTCAATCGTTATCTAATGCTGCAATTCCGAATACAAGAATAATTAGCCCTCTGTGTTCAGACTATTTTCTGCAAGCTGTGCCCGATGCTAAGGCAGATGTTAATGCTTGTCAAACACTTTCTTCTAGTTTCTGTGCAGACTGTCATATTAACTGTTTAGCTTCAAGTGTTAGTGCTTCTGGGCAGCAGTGCCAACATGACATTGATGACAATGAATCGCTGGATGTCCAAAGAAGGCATTTATTGGATATAAATAATGATGAACCTAAGCTTCAGACCTTCTCTACAACCCATCTGAAGCCTTGTAATTCCCAAGCCAAGCAAGAACATGCTTTTTCTGGGGCATTAGCTGGTGTATGTGTCAGCCTTTGTCTGCATCCTGTTGACACAATTAAGACAGTTATTCAATCATGCCGTGCTGAACATCGGTCCATTTTTTACATTGGCAAATCGATTGTTTCTGATAGAGGTTTGCTTGGTCTATATCGTGGAATTACCACAAATGTTGCATCTTCTGCTCCAATTTCTGCAGTTTATACTTTTTCCTATGAATCAGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGTATTATTCTTTTGCCCATTGCGTTGGAGGTGGTTGTGCAAGCATTGCCACGTCTTTCATTTTTACTCCTAGTGAGCGAATAAAGCAGCAGATGCAAGTTCGTTCTAATTATCGCAACTGCTGGGATGTATTGGTTGGAATTATCAGAAATGGTGGTTTTACCTCCCTATATGCAGGTTGGAGGGCTGTACTATGCCGGAATGTTCCACATTCAATTATCAAGTTTTATGCGTATGAAAGCTTGAAGGAAGTGATGCCATCTTTGCCATCAAGTGTTCAACCCAACACGTTTCAAACTTTAGTATGTGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACAACTCCTTTTGATGTGATCAAGACTAGATTACAGACACAGATTCCTGGATCTGCAAACCAATACGATAGTGTGCTCCATGCCCTTTACAAAATCAGTAAGGGTGAAGGTTTGAAGGGCTTGTACAGGGGGTTGATTCCACGGTTGATTATGTACATGACGCAAGGATCACTGTTTTTTGCTTCGTATGAATTTTTCAAGAGGGCATTTTCTCTGGAAGCATCACACCCCACAGATTTATGCATTCAGGCCAATGACAGAGATGTTAGAGAAAGAAAAAACTAG 1977 0.4087 MSGCNKSPKSDRPSIKYWRIQHGGASFEADLSCVDYSPSLSNNENKHRYVSCQPKSPQILSTAQLISAIGQVCDSASQSLSVLLPKENLNQDDNGFPKEKILDSIGVRKNDLVYTSNGTKFYPLTAGAAKIVRERLDFPKVMQKILVFESPNESQDYIHSLFQMFSKASDKITDKDCKKMELGREEMSFKSGNVYWWAGRNASKMLSCQVNVTQPENLESNSPVAGGGISLDTSTPVLANEEKDVCSPDSITHQTQSLSNAAIPNTRIISPLCSDYFLQAVPDAKADVNACQTLSSSFCADCHINCLASSVSASGQQCQHDIDDNESLDVQRRHLLDINNDEPKLQTFSTTHLKPCNSQAKQEHAFSGALAGVCVSLCLHPVDTIKTVIQSCRAEHRSIFYIGKSIVSDRGLLGLYRGITTNVASSAPISAVYTFSYESVKAALLPYLPKEYYSFAHCVGGGCASIATSFIFTPSERIKQQMQVRSNYRNCWDVLVGIIRNGGFTSLYAGWRAVLCRNVPHSIIKFYAYESLKEVMPSLPSSVQPNTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSANQYDSVLHALYKISKGEGLKGLYRGLIPRLIMYMTQGSLFFASYEFFKRAFSLEASHPTDLCIQANDRDVRERKN* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03586 658 FunFam Mitochondrial substrate carrier protein-like 485 647 - -
Lapu3g03586 658 ProSiteProfiles Solute carrier (Solcar) repeat profile. 452 535 IPR018108 -
Lapu3g03586 658 Gene3D Mitochondrial carrier domain 452 649 IPR023395 -
Lapu3g03586 658 Gene3D Mitochondrial carrier domain 344 451 IPR023395 -
Lapu3g03586 658 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 325 639 - -
Lapu3g03586 658 FunFam S-adenosylmethionine carrier 1, chloroplastic/mitochondrial isoform A 331 452 - -
Lapu3g03586 658 ProSiteProfiles Solute carrier (Solcar) repeat profile. 545 633 IPR018108 -
Lapu3g03586 658 Pfam Mitochondrial carrier protein 363 444 IPR018108 -
Lapu3g03586 658 Pfam Mitochondrial carrier protein 546 635 IPR018108 -
Lapu3g03586 658 Pfam Mitochondrial carrier protein 453 536 IPR018108 -
Lapu3g03586 658 SUPERFAMILY Mitochondrial carrier 363 630 IPR023395 -
Lapu3g03586 658 ProSiteProfiles Solute carrier (Solcar) repeat profile. 359 443 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03586 Lapu-Chr3 59248476 59253032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03586 342 634 Chloroplast and Mitochondria Gene Families AT1G07030 31.046 8.54e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03586 - - pvu:PHAVU_002G289600g 1176.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03586 3 59248476 59253032 Lapu3g03586 3 59248476 59253032 ECH