Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03581 ATGGGTTGTGGCTTTTCTAAGTACACAGCATGCTGCATGGGTACAGAGGAAGATGATCATCGGGCTCCTGAGGCTCAGGTTGATGGTGAAAACGAAGACAATGTTGTTGAGGGCATTGACTTGCCGCGATTTCATGAATTCACCATCGATCAGCTTAGGAGGGCTACGTCCGGATTTGCTATTGAAAATATAGTTTCTGAGCATGGAGAAAAGGCTCCAAATGTGGTCTATAAAGGGAGACTTGATAATCAGATGCGAATTGCTGTGAAACGGTTCAACAGAAATGCCTGGCCTGAAGCGCAGCCATTTTTGGAGGAGGCCAGGGCTGTTGGTCAGCTGAGGAACCAAAGATTGATAAATCTTCTTGGATGTTGCTGCGAAGGTGATGAGAGGTTACTTGTTGCAGAATATATGCCCAATGATACTTTGGCAAAACATTTATTCCACTGGGAAAATCAGCCCATGAGATGGGCAATGCGAATGAGAGTTGCACTATGCCTTGCCCAAGCTCTAGAGTATTGTACCAGCAAAGGACGTGCACTCTATCATGATCTAAATGCCTACCGAGTTCTTTATGATGATGACTACAATCCTAGACTTTCATGCTTCGGTTTGATGAAAAATAGTCGAGATGGAAAAAGTTATAGTACAAATTTGGCGTTTACTCCGCCTGAATATCTGAGGACAGGCAGAGTTACTCCAGAGAGTGTAACTTATAGCTTTGGTACTCTTTTGCTTGACCTTCTCAGTGGAAAACATATTCCTCCAAGCCATGCCCTTGACCTCATTAGAGACAAGAACCTTCAGATGCTATCAGATTCTTGCCTAGAAGGGGAGCTTACAAATGATGATGGGACTGAATTAGTGCGTCTAGCCTCACGATGTTTGCAATCTGAACCACGAGAGCGTCCTAATCCAAAGTCGCTGGTTGCTGCTCTAATACCTCTACAGAAGGATTCTGAGGTTCCTTCTCACGTACTAATGGGTATACCGGATGGTACAGCTACTTTTCCCCTTACACCTCTAGGAGAAGCTTGTCTACGAATGGATCTGACTGCTCTGCATGAGGTGATGGAGAAAATGGGGTATAAAGATGATGAGGGTGCAGCAACTGAGCTTTCATTCCAAATGTGGACGAACCAGATGCAGGAAACGTTGAACTCAAAGAAGAAAGGGGATGTTGCTTTTCGGCATAAGGATTTTAAAACGGCAATTGATAGCTATACGATGTTTATTGATGTTGGAACCATGGTTTCGCCAACGGTTTATGCACGTCGTAGTTTATGTTATCTTATGAGCAACATGGCAGATGAAGCACTTAATGATGCAATGCAAGCCCAAGTAATATCCCCCATTTGGTACATTGCGTTTTATTTGCAAGCTGTTGCACTTTTAGCAATGGGCAAGGAGAATGATGCCCAAATGGCACTTAAAGAGGGTTCCTCGCTTGAAATTAAAAAGAGCACAAATTAG 1473 0.4372 MGCGFSKYTACCMGTEEDDHRAPEAQVDGENEDNVVEGIDLPRFHEFTIDQLRRATSGFAIENIVSEHGEKAPNVVYKGRLDNQMRIAVKRFNRNAWPEAQPFLEEARAVGQLRNQRLINLLGCCCEGDERLLVAEYMPNDTLAKHLFHWENQPMRWAMRMRVALCLAQALEYCTSKGRALYHDLNAYRVLYDDDYNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDKNLQMLSDSCLEGELTNDDGTELVRLASRCLQSEPRERPNPKSLVAALIPLQKDSEVPSHVLMGIPDGTATFPLTPLGEACLRMDLTALHEVMEKMGYKDDEGAATELSFQMWTNQMQETLNSKKKGDVAFRHKDFKTAIDSYTMFIDVGTMVSPTVYARRSLCYLMSNMADEALNDAMQAQVISPIWYIAFYLQAVALLAMGKENDAQMALKEGSSLEIKKSTN* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03581 490 ProSiteProfiles Protein kinase domain profile. 62 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03581 490 SUPERFAMILY TPR-like 389 482 IPR011990 GO:0005515
Lapu3g03581 490 Gene3D Phosphorylase Kinase; domain 1 35 137 - -
Lapu3g03581 490 Gene3D Transferase(Phosphotransferase) domain 1 139 330 - -
Lapu3g03581 490 Gene3D Tetratricopeptide repeat domain 372 484 IPR011990 GO:0005515
Lapu3g03581 490 FunFam probable serine/threonine-protein kinase At4g35230 34 137 - -
Lapu3g03581 490 SUPERFAMILY Protein kinase-like (PK-like) 42 322 IPR011009 -
Lapu3g03581 490 FunFam probable serine/threonine-protein kinase At5g41260 139 330 - -
Lapu3g03581 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 22 488 IPR045845 GO:0004672|GO:0009742
Lapu3g03581 490 FunFam probable serine/threonine-protein kinase At4g35230 383 490 - -
Lapu3g03581 490 Pfam Protein tyrosine and serine/threonine kinase 75 312 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03581 Lapu-Chr3 59194336 59207077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03581 47 338 Glycoside Hydrolase AT3G07070 32.812 4.77e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lapu3g03581 PK_Tyr_Ser-Thr 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03581 K14500 - gmx:100797107 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03581 3 59194336 59207077 Lapu3g03581 3 59194336 59207077 ECH