Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03571 ATGAAGTTGTCTACTTTATTGTTGTTGCTTGGTTTGGTTTCCGTGCTCTCTTTTGTGGCTTCTGTCAGGGTGCCTTCAAATGAAGTTTTGGCACTTAAAACATTCAAAGAAGCTGTTTGTGAAGATCCACATATGGCTTTGTCCAATTGGAATACTCTGGATTCAGATCCTTGTGACTGGAATGGTGTTTCTTGCACTGCGCCACGAGATCATGTCATCAAGCTTAACATATCAGGGGCTTCTTTGAGGGGGTTTCTTGCTCCAGAATTTGGGAAAATCACCTACATACAAGAACTGATCTTGCATGGCAACAATCTCATTGGAACAATACCTAAAGAATTGGGCATGTTGAAATCTCTTAAAGTGTTGGACTTCGGAATGAATCAGTTATCTGGACCAATTCCTCCGGAGATTGGAAATATGACCCAACTGATGAAAATAAACCTGCAGTCCAATGGGTTGACTGGTGGGCTACCTTCAGAGCTAGGAAATTTGAAATACCTTCAAGAGCTTCGGCTGGATAGGAATAAGCTTCAAGGATCTCTTCCTGGTGGTAGCAGTTCAAATTTTTCTTCAAATATACATGGAATGTGTGCCTCGGGTGGGAACTTAACTGGCCATTGTTGTATATCTCAGTTAAAAATTGCAGATTTTTCATATAACTTTTTCGTGGGCAGCATACCCAAATGCTTGAAGTATCTTCCGAGATCAAGCTTTCAAGGAAATTGTCTCCATATCAAAGACATAAAACAGAGGACTTTGGTGCAATGTGGTGGTGCTTCACCTGCCCAAAGCGGTCCAGTAGTGAACCCGAAGTCCCAACCTGTTCCCAAACACGTAACCAAGCATCAAGAAGCATCAAAACCTTCTTGGCTTTTGGCTATAGAAATAGTAACGGGAACCATGGTTGGTTCTCTCTTTGTTATTGGTATTCTCACTGCAATTCAGAGGTGTAACAACAAATCATCCATCATTATACCTTGGAAAAAATCTGGAAGTGGAAAAGATTATATGACAATACATATAGACTCGGAGATGTTGAAGGATGTGATGAGGTATAGCAGACAGGATCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGTCTGGTGTACAAGGGTACAATGAAAGGTGGACCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAAGAGAATTGGACAGGATACCTTGAGCTCTATTTTCAAAGAGAGGTGGCAGATTTGGCAAGATTGGATCATGATAACGCAGGAAAACTGCTAGGATATTGTAGAGAGAGCAGTCCATTTACAAGGATGCTGGTTTTTGAATATGCCTCAAACGGAACACTCTATGAGCACCTACATTGTTATGGAGAAGGGTGCCAGTTGTCTTGGACACGGCGTATGAAAATTATCATTGGCATTGCACGTGGACTCAAGTATTTGCACACTGAAATTGAGCCACCATTCACCATCTCAGAATTGAATTCCAATGCTGTTTACCTTACAGAAGATTTTTCCCCTAAGCTCGTGGATTTTGAAAGTTGGAAGACCATTTTTGAAAGATCAGAAAAAAATTCTGGTTCAGTTAGCAGCCAAGGTGCTGTTTGTGTTCTACCAAACTCCCTTGAAGCACGCCATCTCGACCCCAAAGGAAACATATATGCTTTTGGTGTACTTCTACTGGAGATAATCAGTGGAAGACCTCCATACTGCAAGGACAAAGGATACTTGGTGGATTGGGCCAGGGACTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGCTCCTGAGTTGAAGCATTTTAGATATGAAGACCTCAAAGCAATATGTGAGGTGATAACTCTTTGCATCAGTCCTGATCCCTCTGTCCGTCCATCAATGCGTGAATTATGCATTATGTTGGAGAGCAGAGTGGACACATCAATAAATGTGGAGCTAAAGGCGTCATCTCTGGCTTGGGCTGAACTAGCCCTTTCATCATAA 1989 0.4203 MKLSTLLLLLGLVSVLSFVASVRVPSNEVLALKTFKEAVCEDPHMALSNWNTLDSDPCDWNGVSCTAPRDHVIKLNISGASLRGFLAPEFGKITYIQELILHGNNLIGTIPKELGMLKSLKVLDFGMNQLSGPIPPEIGNMTQLMKINLQSNGLTGGLPSELGNLKYLQELRLDRNKLQGSLPGGSSSNFSSNIHGMCASGGNLTGHCCISQLKIADFSYNFFVGSIPKCLKYLPRSSFQGNCLHIKDIKQRTLVQCGGASPAQSGPVVNPKSQPVPKHVTKHQEASKPSWLLAIEIVTGTMVGSLFVIGILTAIQRCNNKSSIIIPWKKSGSGKDYMTIHIDSEMLKDVMRYSRQDLEVACEDFSNIIGSSPDSLVYKGTMKGGPEIAVISLCIKEENWTGYLELYFQREVADLARLDHDNAGKLLGYCRESSPFTRMLVFEYASNGTLYEHLHCYGEGCQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFSPKLVDFESWKTIFERSEKNSGSVSSQGAVCVLPNSLEARHLDPKGNIYAFGVLLLEIISGRPPYCKDKGYLVDWARDYLEMPEVMSYVVAPELKHFRYEDLKAICEVITLCISPDPSVRPSMRELCIMLESRVDTSINVELKASSLAWAELALSS* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03571 662 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Lapu3g03571 662 Gene3D Phosphorylase Kinase; domain 1 338 444 - -
Lapu3g03571 662 SUPERFAMILY L domain-like 27 235 - -
Lapu3g03571 662 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Lapu3g03571 662 Gene3D Ribonuclease Inhibitor 140 264 IPR032675 -
Lapu3g03571 662 Gene3D Transferase(Phosphotransferase) domain 1 445 652 - -
Lapu3g03571 662 ProSiteProfiles Protein kinase domain profile. 363 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03571 662 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Lapu3g03571 662 Pfam Protein tyrosine and serine/threonine kinase 367 633 IPR001245 GO:0004672|GO:0006468
Lapu3g03571 662 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Lapu3g03571 662 SUPERFAMILY Protein kinase-like (PK-like) 339 637 IPR011009 -
Lapu3g03571 662 PANTHER PROTEIN MALE DISCOVERER 2 15 660 - -
Lapu3g03571 662 MobiDBLite consensus disorder prediction 261 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03571 Lapu-Chr3 59132415 59137265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03571 7 642 Receptor kinase-like Gene Family AT2G35620 29.556 2.41e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lapu3g03571 PK_Tyr_Ser-Thr 2.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03571 - - gmx:100781978 1146.34