Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03550 ATGGAGAAACATCAAGTGCTGTCCCCTATCTCATCTTCATCATCTCCTTCTGCTTCTGATTTTAAGCTTGGTGATTATGATCATGATCATAACTCTGATGTTCATCATGTGAAGAAGGGTGTAGATTTTTTAAGAACTCTAGGGCCAAGCCAGAAAGTTGGCAGGGAAAAAAAGCAGCACAGATATGCATTCCAAACAAGGAGTCAGATTGATATACTGGATGATGGATATCGGTGGAGAAAGTATGGAGAAAAGTCCGTCAAAAACAATAAATTTCCTAGAAGTTACTACAGATGTTCTTATCGAGGATGCAATGTGAAGAAACAAATCCAACGCCATAACAAGGACGAAGAGATTGTGGTAACAACCTATGAAGGAACACATTCTCATCCTGTGGAGAAGACAACTGAAAGTTTCGAGCAGATACTGAGAAACCATCACATATATAGCCTCACTCATGTCCTTAGTGTATCTCCAAAACTGTTAGAATAG 492 0.3923 MEKHQVLSPISSSSSPSASDFKLGDYDHDHNSDVHHVKKGVDFLRTLGPSQKVGREKKQHRYAFQTRSQIDILDDGYRWRKYGEKSVKNNKFPRSYYRCSYRGCNVKKQIQRHNKDEEIVVTTYEGTHSHPVEKTTESFEQILRNHHIYSLTHVLSVSPKLLE* 164
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03550 163 Gene3D WRKY domain 60 126 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g03550 163 MobiDBLite consensus disorder prediction 1 26 - -
Lapu3g03550 163 Pfam WRKY DNA -binding domain 74 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03550 163 SUPERFAMILY WRKY DNA-binding domain 65 132 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g03550 163 MobiDBLite consensus disorder prediction 1 20 - -
Lapu3g03550 163 SMART WRKY_cls 73 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03550 163 FunFam WRKY transcription factor 57 59 133 - -
Lapu3g03550 163 ProSiteProfiles WRKY domain profile. 68 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03550 163 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 39 136 IPR044810 GO:0003700
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu3g03550 Lapu-Chr3 58953641 58954507 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03550 60 150 WRKY Transcription Factor Family AT5G13080 76.923 3.17e-51 159
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu3g03550 WRKY 1.7e-25 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03550 - - gmx:100127378 238.81
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03550 3 58953641 58954507 Lapu3g03550 3 58953641 58954507 ECH