Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03538 ATGGCAAATGAACTGAATGTGAGGCAAGGAGAACCAACTCTGGTGCCACCTGCAGAAGAAACGAAGAAGGGTCTCTACTTCCTTTCAAACCTTGACCAGAACATAGCACATCCAGTTCGCACAGTTTTCTTTTGTAAGTCTGCATGCAGAGGCAACGAGGATGCAGCACAAGTCATCAAGGATTCTTTGTCAAAGGTTCTTGTTCACTATTACCCCATGGCTGGCAGGTTAGTCATCAGTTCAGAAGGGAAACTGATTATGGACTGCACAGGTGAGGGTGCTGTGTTTGTTGAGGCTGAAGCAAACTGTGTTGTAGAGGAATTTGGGACAAAGCCTGACCTTGAAACTCTTGGGAAACTGGTTTATGATATCCCTGGTGCAACCAACATGCTTCAGATACCTCCTTTGCTAGTTCAGGTAACAAAGTTCAAATGTGGAGCATTTGTTTTGGGGTTAAACATGAACCATTGCATGAGTGATGGTATAAGTGCTATGCAATTTGTGAAGTCATGGGGAGAGACAGCCAGAGGCTTGAACTTGAGCGTTTCGCCATTTCTGGACCGAACGATACAAGTACCACGAAACCCTCCCAAAATAGAGTTCCCACACCACGAGTTTGACGAAATTGAAGACATATCAAATAACAGAAAACTCTACGAGGAAGAGGTCATCTACAGGTCCTTCAATTTCAACCCAGATAAACTTGAGCTGCTTAAGAAAAGAGCCACAGAAGATGGTGTTGTAAAGAAGTGCTCTACTTTTGAAGCACTCACAGCTTTTGTGTGGAGAGTCAGAACTGAAGCCTTAGGGATGCACCCTAATCAGCAAACCAAGCTTCTTTTTGCTGTTGATGGAAGGTTCAGATTCGTGCCTCCAACACCAAAAGGGTACTTTGGAAATGCAATTGTGTTGTCGAATGCTCTATGCAAGGTAGGGGAGTTGTTGAACAAGCCACTGTCACATACTGTGGGACTGGTTCGCAAGGCAATTGACATGGTCACTGACAGTTACATGAGATCCGCTATTGATTATTTTGAAGTGAAAAGAGCAAAGCCTTCCTTAACAGCAACCCTTGTGATCACAACATGGACTAGGATACCTTTCAACTCTGTAGATTTCGGATGGGGTAAACCCTTTTTCTTCGGTCCTGTAACTCTGCCAGGGAAGGAAGTGATCTTGTACTTATCACCCAACAATGAAGAAACAAAAAGCATAGACGTGCTACTTGGTTTGCCATCTTCTGTCATGAAAAGATTTGAAGCACTGATAGAAATC 1275 0.4376 MANELNVRQGEPTLVPPAEETKKGLYFLSNLDQNIAHPVRTVFFCKSACRGNEDAAQVIKDSLSKVLVHYYPMAGRLVISSEGKLIMDCTGEGAVFVEAEANCVVEEFGTKPDLETLGKLVYDIPGATNMLQIPPLLVQVTKFKCGAFVLGLNMNHCMSDGISAMQFVKSWGETARGLNLSVSPFLDRTIQVPRNPPKIEFPHHEFDEIEDISNNRKLYEEEVIYRSFNFNPDKLELLKKRATEDGVVKKCSTFEALTAFVWRVRTEALGMHPNQQTKLLFAVDGRFRFVPPTPKGYFGNAIVLSNALCKVGELLNKPLSHTVGLVRKAIDMVTDSYMRSAIDYFEVKRAKPSLTATLVITTWTRIPFNSVDFGWGKPFFFGPVTLPGKEVILYLSPNNEETKSIDVLLGLPSSVMKRFEALIEI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03538 425 Gene3D - 208 423 IPR023213 -
Lapu3g03538 425 FunFam Tryptamine hydroxycinnamoyl transferase 210 424 - -
Lapu3g03538 425 Gene3D - 2 207 IPR023213 -
Lapu3g03538 425 FunFam Spermidine hydroxycinnamoyl transferase 5 206 - -
Lapu3g03538 425 Pfam Transferase family 11 421 - -
Lapu3g03538 425 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03538 Lapu-Chr3 58806009 58808039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03538 4 423 Monolignol Biosynthesis Gene Families AT5G48930 35.862 6.02e-89 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03538 K15400 - gmx:100527026 704.131