Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03537 ATGGAGTTTGTGAAGAAGTGTAAGAGAGTATTGGAAAGCAGCAAGAGATTGCATCCAGAGAACAATGGAAGTGGAAGCTATGGCAGATTGAAAAACAAACAAAGGCAACATAGGAAGAAGTCTCATGTGGCTCCACATGGTTGTCTTTGTGTCTACGTTGGACCCGAGAGAGAGAGATTCATAATCAAGATCGAGATAGCGAACCACCCTTTGTTCAAAGAGCTTTTGGACGGTGCTGAGAGAGAATATGGGTATAGAAACGATGGTCCCTTGTGCCTCCCTTGCCATGTTGACTTGTTCTGTGAGGCACTGACGGAGATGGAAATGGGCACCACCCAAGAACATGTCATGCGTACTTTCTTGGCGAAGGATCTAGGGTTGGATTGCTCCAAAGCTGTATAA 402 0.4552 MEFVKKCKRVLESSKRLHPENNGSGSYGRLKNKQRQHRKKSHVAPHGCLCVYVGPERERFIIKIEIANHPLFKELLDGAEREYGYRNDGPLCLPCHVDLFCEALTEMEMGTTQEHVMRTFLAKDLGLDCSKAV* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03537 133 Pfam Auxin responsive protein 6 104 IPR003676 GO:0009733
Lapu3g03537 133 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 104 IPR003676 GO:0009733
Lapu3g03537 133 MobiDBLite consensus disorder prediction 15 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03537 Lapu-Chr3 58796389 58797167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03537 20 100 Calmodulin-binding Proteins AT4G34750 38.462 6.96e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03537 K14488 - gmx:102667331 148.673