Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03528 ATGGAAAAGCTGAATTTTGTTAAAAATGGAGTGAGCAAATTGCCTCCTGGTTTTCGTTTTCAACCAACAGATGAAGAACTTGTTTTCCAATACCTCAAGTGCAAGGTCTTCTCCTATCCCTTGCCTGCTTCTATCATTCCTGAGATCAATGTCTGCAAGTATGACCCGTGGGATTTACCAGGGAATTGCGATCCGCAAGAGAGGTATTTTTTCAGTCCGAAGGAAGCAAAGTATAGAAATGGTAATCGCATGAACAGAACAACAAAGTGTGGATATTGGAAGGCAACAGGTTCAGACAAGAGAATATCATCATCTTCAAATGCCTGTAATGGCATTGTGGGGATAAGAAAAACATTGATTTTTTATGAAGGAAAATCTCCAAAAGGCTCCAGAACTGACTGGGTCCTCCATGAATATCGTCTTGTTAATGCAGAAACTGGTGCTTGCAACTCATCCCACAACTACGTGAACGAGATTGGAGATTGGGTTTTGTGTCGCTTATCGATGAAGAAAAGAAACATAGAAAGTGATGGCCATGGAAAGCAAAGAGTTGAAAGTGGTTCAAGATTAATGTTTGATTTTATGATGGTTGGAAAAACCCATTCTTCTACATCCTCGTCGTGTTCAAGTTCTAATAACGTCATGGAAGTCTCTTCAAATGCATCGGATCATGAAGAGACAAGTGGTGGCTATGCCTATTTTTAG 705 0.4014 MEKLNFVKNGVSKLPPGFRFQPTDEELVFQYLKCKVFSYPLPASIIPEINVCKYDPWDLPGNCDPQERYFFSPKEAKYRNGNRMNRTTKCGYWKATGSDKRISSSSNACNGIVGIRKTLIFYEGKSPKGSRTDWVLHEYRLVNAETGACNSSHNYVNEIGDWVLCRLSMKKRNIESDGHGKQRVESGSRLMFDFMMVGKTHSSTSSSCSSSNNVMEVSSNASDHEETSGGYAYF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03528 234 MobiDBLite consensus disorder prediction 202 234 - -
Lapu3g03528 234 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 207 - -
Lapu3g03528 234 ProSiteProfiles NAC domain profile. 14 170 IPR003441 GO:0003677|GO:0006355
Lapu3g03528 234 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Lapu3g03528 234 MobiDBLite consensus disorder prediction 202 226 - -
Lapu3g03528 234 Gene3D NAC domain 23 175 IPR036093 GO:0003677|GO:0006355
Lapu3g03528 234 SUPERFAMILY NAC domain 10 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03528 Lapu-Chr3 58671607 58672837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03528 1 172 NAC Transcription Factor Family AT5G13180 61.628 9.13e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu3g03528 NAM 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03528 - - gmx:100812015 416.001