Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03524 ATGGAGGATGGCCGTCAAAATGAAAATAGCAGGCATAAGATGGAATACTATAGAGGAGCACATTCCCTGTGGAATACTGATTCCCAGCATCAAGTGAAAGAGCCAAATGCACTGGTTATGAATAAGAAGATTAGGTCCATTATGGCTGAAAGGCAGGCTGCCTTTCTAGAACTTGAACTGGAGGCTGCAATATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGCAGCCATGCGGGAGAGGGATGAAGCACTTGCTCAAAGGGATAATGCCATTTTGGAACGGGATAATGCCCTTGCAGCCCTTCAGAGTCGGAACAACTCTGTCAACTTTCCATTTGGCGGTGGAATTCAATGTGGATCAAAACGAATGCACCGTTCTTCAAACCATCTTTCTAACATGTCCGAAGCTGCATACAAAACAAAGGATATGATAATAAAGGATGCCTCCCCAGTGACAATTATACCTTCTGAAGCTGTCAAATCTCATCAAGCAAAGAGAACAAAGGAGAACAAGGTAATTAGTTCTAAGGCATCAAACCCACCCTACAAAGTAAAGAAAATGGGTGAAGATTTAAATAGGAAGGCTTCTTTTGAAGGTACAAAGATCCGATCTGAATGGCATAGGCAAGATGTTGGCCTGAATTTGGTTACATTTGATGAAACTACTATGCCGGTTCCAGTTTGCACATGTACTGGCATACCACGACAGTGCTACAAATGGGGGAATGGCGGATGGCAGTCGTCTTGTTGTACCACAACATTGTCTATGTATCCATTACCACAGCTTCCAAACAAGCGCCATGCTCGCATTGGAGGACGAAAGATGAGTGGAAGTGTCTTTACAAGACTTCTCAGCAGGTTGGTGTTTGAAGGCCATGATTTATCTATACCATTAGATCTTAAGGAGTACTGGGCCAGACATGGAACAAATCGCTACATCACTATCAAGTAG 954 0.435 MEDGRQNENSRHKMEYYRGAHSLWNTDSQHQVKEPNALVMNKKIRSIMAERQAAFLELELEAAISEKNEALAARDAAMRERDEALAQRDNAILERDNALAALQSRNNSVNFPFGGGIQCGSKRMHRSSNHLSNMSEAAYKTKDMIIKDASPVTIIPSEAVKSHQAKRTKENKVISSKASNPPYKVKKMGEDLNRKASFEGTKIRSEWHRQDVGLNLVTFDETTMPVPVCTCTGIPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLVFEGHDLSIPLDLKEYWARHGTNRYITIK* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03524 317 Coils Coil 53 94 - -
Lapu3g03524 317 SMART GAGA_bind_2 1 317 IPR010409 -
Lapu3g03524 317 PANTHER - 22 317 IPR010409 -
Lapu3g03524 317 MobiDBLite consensus disorder prediction 160 186 - -
Lapu3g03524 317 Pfam GAGA binding protein-like family 13 317 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03524 Lapu-Chr3 58642845 58647039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03524 1 317 BBR or BPC Transcription factor family AT2G21240 57.994 8.35e-126 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lapu3g03524 GAGA_bind 1.8e-97 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03524 - - gmx:100813103 577.015