Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03521 ATGGCTCCCTCAGACCAATCTCGCCACTCTCTTGTTCATGGATTCTTGTACTCCTCAAAAACACTGTCCCATTTGAATAATATCACCAATCATGGGTTGCCATTGCTACCATCATCCTCAATTGCCTCGCATTCATCATCATCATCATCATTGCCACTTCAGGGTGGGGCCAAGGGTCCTGTGATCCTTTCACCAAAAGAGAGAATCCGCATGTTTTCTCCTGCTTACTATGCGGCATGCAGTGCCGGTGGGGTCTTCAGTTGTGGCCTTACCCACATGGCTGTCACTCCTCTCGATCTTGTCAAGTGCAACATGCAGATTGATCCGGTAAAGTACAAGAACATCTCATCAGGATTTGGAGTATTACTGAAGGAGCAGGGTGCTAAAGGTTTCTTCAGGGGATGGGTGCCTACTCTGCTGGGGTACAGTGCTCAAGGAGCATGCAAGTTTGGATTTTATGAGTTCTTCAAGAAGTATTACTCAGACCTTGCAGGACCCGAGAATGCAGTGAAGTACAAAACGATCATATACCTAGCTGGTTCTGCTTCAGCTGAAGTAATTGCTGATATTGCCCTTTGTCCTATGGAAGCTGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTCGAGGTTTGTCAGATGGGTTGCCCAAGTTTATCAAGGCTGAGGGTGCTTCTGGGTTGTATAAAGGCCTCGCTCCTCTTTGGGGCCGTCAAATTCCATACACGATGATGAAATTTGCTTCCTTTGAGACCGTTGTGGAGATGATCTACAAATACGTCATCCCAATCCCTAAGGAGAAATGCAGCAAAAATAAGCAGCTTGGGGTGAGTTTTGCAGCTGGATATGTAGCAGGTGTGCTGTGTGCAATTGTCTCACATCCTGCTGACAACCTCGTTTCTTTTCTCAACAATGCCAAGGGAGCCACTGTTGGTGATGCTGTGAAGAAAATTGGGGTGGTAGGTCTTTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTGACTGGAGCACAGTGGGGACTATATGATTCATTTAAAGTATTTGTAGGACTGCCTACTACTGGAGGAAGTGCTGCTCCTCCTGCTCCTGTTAAGTAG 1110 0.4667 MAPSDQSRHSLVHGFLYSSKTLSHLNNITNHGLPLLPSSSIASHSSSSSSLPLQGGAKGPVILSPKERIRMFSPAYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPVKYKNISSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTIIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFIKAEGASGLYKGLAPLWGRQIPYTMMKFASFETVVEMIYKYVIPIPKEKCSKNKQLGVSFAAGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAAPPAPVK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03521 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Lapu3g03521 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
Lapu3g03521 369 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Lapu3g03521 369 Pfam Mitochondrial carrier protein 177 260 IPR018108 -
Lapu3g03521 369 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 61 362 IPR044677 GO:0005315|GO:1990547
Lapu3g03521 369 FunFam Phosphate carrier protein, mitochondrial 75 353 - -
Lapu3g03521 369 SUPERFAMILY Mitochondrial carrier 76 347 IPR023395 -
Lapu3g03521 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
Lapu3g03521 369 Gene3D Mitochondrial carrier domain 76 353 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03521 Lapu-Chr3 58593474 58596626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03521 64 366 Chloroplast and Mitochondria Gene Families AT5G14040 85.809 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03521 K15102 - gmx:100800530 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03521 3 58593474 58596626 Lapu3g03521 3 58593474 58596626 ECH