Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03519 ATGAAGAGCTTGCCAACATGGAAAAGCATGGCAATGACTGTGGTGTTGCTTCAATTGAGCTTTTCCTTGGAGATCTTCTGTCTCTCTAATCACGCAGATAGAATTGTTCGGCTTCCCGGGCAACCCAACATAGGCTTCCAACAGTTCTCAGGATATGTTACAGTGGATGACATCAAACACAAAGCTCTCTTTTACTATTTTGTTGAATCAGAAACTCATCCAGCTTCAAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGCTGTTCTTCTCTTGGAGTGGGTGCATTCTCTGAAAATGGACCTTTTAGACCTAATGGGGAAGTTCTGATTAAAAATGAGTACAGTTGGAACAGAGAGACAAACATGTTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTATGCTAAAGGTGGCTCCTCCTATGAGACTGTGAATGATGAGACAACAGTACTTTTTGTTTCTCAAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTTAACAAGTTCCCTCAATTCAGGCACAGAGATTTGTTTCTAGCAGGTGAAAGCTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATAAACAAAAAGGAGAAGTTATTCAATCTGAAAGGCATAGCCTTGGGTAATCCAGTTCTAGAATATGCCACTGACTTAAATTCAAGGGCGGAGTTCTTCTGGTCTCACGGATTGATATCTGATTCAACGTACAAATTGTTCACTACCGGTTGTAATTATTCCCGGTATGTCAGTGAATACTATAGAGACTCGATTTCGCCGCTTTGTTCCAAGGTTTTGAGGCAAGTAGCCAGAGAAACCAGTAAGTTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAATCCAAAGCTATTTGTCCTCAAGGCCAAAAAACAAACGAGAGCATAGATGTATGTGTAGATGACAAAGTTACTAATTACTTGAACCGAAAAGATGTACAAGAGGCGCTCCATGCCAAGCTTGTTGGAGTCCGAAAGTGGGATGTCTGCAGCAATAACAGCATTTTGGACTATGATATGCTCAACCTGGAGGTACCTACACTCCCAGTAGTTGGATCACTCATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGTACCTTAGTTCAGAAGCTAGCTAGACAACTACGACTGAATACAACAGTCCCCTACAGAGTATGGTTTGAAGGTCAGCAGGTTGGTGGATGGACTCAAGTTTATGGCAGTATCCTGTCATTTGCTACTGTCAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCGCTTGTTTTGTTCAAGTCCTTCTTGGAAGATAGGCCTCTACCTGAAATTTTCTGA 1425 0.4274 MKSLPTWKSMAMTVVLLQLSFSLEIFCLSNHADRIVRLPGQPNIGFQQFSGYVTVDDIKHKALFYYFVESETHPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNEYSWNRETNMLYLETPVGVGFSYAKGGSSYETVNDETTVLFVSQARDNLVFLQRWFNKFPQFRHRDLFLAGESYAGHYVPQLAKLMIEINKKEKLFNLKGIALGNPVLEYATDLNSRAEFFWSHGLISDSTYKLFTTGCNYSRYVSEYYRDSISPLCSKVLRQVARETSKFVDKYDVTLDVCISSVLSQSKAICPQGQKTNESIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNNSILDYDMLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLRLNTTVPYRVWFEGQQVGGWTQVYGSILSFATVRGASHEAPFSQPERSLVLFKSFLEDRPLPEIF* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03519 474 FunFam Carboxypeptidase 368 467 - -
Lapu3g03519 474 Gene3D alpha/beta hydrolase 29 297 IPR029058 -
Lapu3g03519 474 ProSitePatterns Serine carboxypeptidases, histidine active site. 437 454 IPR033124 GO:0004185
Lapu3g03519 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Lapu3g03519 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Lapu3g03519 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Lapu3g03519 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Lapu3g03519 474 FunFam Carboxypeptidase 28 471 - -
Lapu3g03519 474 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Lapu3g03519 474 Pfam Serine carboxypeptidase 42 466 IPR001563 GO:0004185|GO:0006508
Lapu3g03519 474 SUPERFAMILY alpha/beta-Hydrolases 31 471 IPR029058 -
Lapu3g03519 474 Gene3D - 368 466 - -
Lapu3g03519 474 Gene3D - 320 354 - -
Lapu3g03519 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 454 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03519 Lapu-Chr3 58582473 58585960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03519 328 470 Calmodulin-binding Proteins AT2G22960 27.972 7.21e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03519 K16297 - gmx:100800002 893.264