Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03460 ATGTCTGTGGTTCCTTACAATTGCAACCACACCACTGAAAAGGGTAGCAGTGGTGGTGAAAATGAAAGCTTTCACCAGTTTTTTGAGCGCTGGATTTCTGAGCAAAATCAGCATCTGAAGGACCTTTTAGTTGCTGAATCAACTCAGGTAACAGGTGAGGAACTTCAGTCACTGAATCATAAGGTGGTTGAGCATTATGAGTACTACTATAAGGCCAAGTCGAGGTGTGCAAAGCAAGATGTGTTGGCCATGTTGTCCCCAACATGGACGAGTTCCTTGGAAGAGGCTTTTCTTTGGATTGGTGGATGGAGACCAAGCATGGCCTTCCACTTGCTATATTCCAAGTCTGGTTTGCAATTTGAGGCCAGGCTCAATGAATTGATCCAAGGTCTAAGAACACATGACTTGGGAGACCTGTCAGCATCCCAACTAGCTCAGCTTGATGGGATGCAAAAGAGGACCATCTCAGAGGAGAGGGAGATCACAGATTTGATGGCAAGGCACCAGGAGACGGTGGCTGATGCCTCAATGGTGGAGTTGTCTCATGTGGCTTCTGAGATGATTAGAGCCAATGAAAGAGGAGAGGTTGAAAATAGTAAAGAAATAGAGGACAAGGTTGAATCAACCCTGGTGCCTAAGGAAGAGGGTTTGGAGAAGATCCTGCAGAAAGCTGATAAACTTAGGTTGGGAACACTGAAGGCTATTGTGAATGTTCTGACTCCAAAACAGGCCATTCACTTCTTGATTGCTGCTGCAGAACTGCACCTGAGGCTACATGAGTGGGGAAAGAAGATGGATGCCAGAAAGGGAAATAATGGTACTGGTGAGAATAAAAACCATAATCCATCAATTTGA 855 0.4526 MSVVPYNCNHTTEKGSSGGENESFHQFFERWISEQNQHLKDLLVAESTQVTGEELQSLNHKVVEHYEYYYKAKSRCAKQDVLAMLSPTWTSSLEEAFLWIGGWRPSMAFHLLYSKSGLQFEARLNELIQGLRTHDLGDLSASQLAQLDGMQKRTISEEREITDLMARHQETVADASMVELSHVASEMIRANERGEVENSKEIEDKVESTLVPKEEGLEKILQKADKLRLGTLKAIVNVLTPKQAIHFLIAAAELHLRLHEWGKKMDARKGNNGTGENKNHNPSI* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03460 284 MobiDBLite consensus disorder prediction 1 21 - -
Lapu3g03460 284 ProSiteProfiles DOG1 domain profile. 21 268 IPR025422 GO:0006351|GO:0043565
Lapu3g03460 284 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 22 278 - -
Lapu3g03460 284 Pfam Seed dormancy control 38 114 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03460 Lapu-Chr3 57863961 57864815 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03460 16 259 bZIP Transcription Factor Family AT5G06960 26.230 5.51e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03460 - - gmx:100784399 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03460 3 57863961 57864815 Lapu3g03460 3 57863961 57864815 ECH