Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03458 ATGAAAAGCCTCTGCCTTGGGTCGTTCCTTGCTGCTGGTGCCCCAGTTAGTTCAAGAGCCTTTGGAGGCCATTTAACCAGAAAGTGCTTTCACAAGCAAGTTCATTTCCACTCCCGTTCTGTTGTTTTATCTTCAATCTCATGTTCTGCAACTGTATCAGTGTTGCCAGAAGTAGAAGAGAAACAGATATTTGATGGAGAGAAGGCTAATTTGCTTGTTAGAGATCTCAGAAAAAGCTTTGATTCAGGCAGGACAAAGAGCTACGAATGGAGGGTTTCCCAGTTGGAGGCCATTATGAAGATGTTAAAAGAAAGAGAGAAGGAAATTACTGAAGCTCTATATAAGGACCTTGCTAAACCTCAACTTGAAGCATTTATAACTGAGGTTTCCCAGGCCAAATCCTCATGTAGTGAAGCTCTTGAAGAGCTGAAACACTGGATGAAGCCCGAGAGGGTGACTACTTCAATCACAACATTTCCATCATCAGCAGAGATTGTGCCAGAACCACTGGGGGTTGTGTTGGTTATCTCAACATGGAACTTTCCTTTCCTGTTATCAATGGATCCAGTCATTGGAGCCATTTCTGCGGGTAACACAGTGGTCCTAAAACCATCAGAAATTGCTCCAGCAACATCATCACTGCTTGCTAATTTGATCGAACAATATTTAGACAACTCTGCCATTAGAGTTGTTGAAGGGGCTGTTCCTGAAACAACGGCACTTCTGGAGCAGAAGTGGGATAAGATACTTTATACAGGTAACTTTGCTAGAGTTGGTCGCATTGTCATGGCTGCAGCTGCAAAGCATCTTACACCAGTGATTCTGGAACTTGGAGGAAAGTGCCCCGCTGTTGTTGAATCAGATGTCAACTTACAAGTTACTGCTAGGAGGATTATAGCTGGCAAGTGGGCATGCAATAGTGGACAAGCGTGCATTTCTGTTGATTATATCATCACAAGAAAAGAGTTTGCTCCAAAGCTGATAAGTGCCTTAAAAGAAGAATTGGAACAATTTTTTGGGAAAGATCCATTGGAATCTAAAGACATGTCACGGATTGTGTCTCCTAACCAGTTTGCACGGCTTGTGAAGCTCTTGGATGAGGATAAGGTATCTGACAAAATCGTTTTAGGAGGTCAGAGGGATGAGAAGAAATTAAAAATTTCCCCAACTATCATGTTGGATGTTCCCGAAGATGCTTTGGTAATGCAGGATGAGATATTTGGGCCAATAATGCCAATCATCACAGTAGACAACATAGAAGATTGCTACAGTATAATCAAATCAAGGCCAAAACCTCTTGCCGCATATCTCTTCACAAACAATGAGCAGTTGAAGAAGGATTATGTGGATAAGATATCTTCAGGAGGGATGCTCATCAATGACGCTGTCATCCATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTGTTACCATGGAAAGTTCTCTTTTGATAGTTTCAGCCATAGGAAGTCGGTTCTCTATAGAAGTTTTGATGCAGATTCATCCATAAGGTACCCCCCATACACACCTGAGAAGGAAAAATTATTGAAGGCCCTTATCAGTGGCAATATTGTTCAAATAATTCTTGCTCTTTTTGGATGGTCTTAA 1629 0.4199 MKSLCLGSFLAAGAPVSSRAFGGHLTRKCFHKQVHFHSRSVVLSSISCSATVSVLPEVEEKQIFDGEKANLLVRDLRKSFDSGRTKSYEWRVSQLEAIMKMLKEREKEITEALYKDLAKPQLEAFITEVSQAKSSCSEALEELKHWMKPERVTTSITTFPSSAEIVPEPLGVVLVISTWNFPFLLSMDPVIGAISAGNTVVLKPSEIAPATSSLLANLIEQYLDNSAIRVVEGAVPETTALLEQKWDKILYTGNFARVGRIVMAAAAKHLTPVILELGGKCPAVVESDVNLQVTARRIIAGKWACNSGQACISVDYIITRKEFAPKLISALKEELEQFFGKDPLESKDMSRIVSPNQFARLVKLLDEDKVSDKIVLGGQRDEKKLKISPTIMLDVPEDALVMQDEIFGPIMPIITVDNIEDCYSIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVIHVATRGLPFGGVEESGMGCYHGKFSFDSFSHRKSVLYRSFDADSSIRYPPYTPEKEKLLKALISGNIVQIILALFGWS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03458 542 Pfam Aldehyde dehydrogenase family 66 499 IPR015590 GO:0016491
Lapu3g03458 542 SUPERFAMILY ALDH-like 72 515 IPR016161 GO:0016491
Lapu3g03458 542 PIRSF ALDH 51 538 IPR012394 GO:0006081
Lapu3g03458 542 PANTHER ALDEHYDE DEHYDROGENASE 68 534 IPR012394 GO:0006081
Lapu3g03458 542 FunFam Aldehyde dehydrogenase 279 479 - -
Lapu3g03458 542 Coils Coil 92 112 - -
Lapu3g03458 542 FunFam Aldehyde dehydrogenase 77 282 - -
Lapu3g03458 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 77 497 IPR016162 GO:0016491
Lapu3g03458 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 279 479 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03458 Lapu-Chr3 57843613 57851692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03458 16 542 Aldehyde Dehydrogenase Gene Family AT4G34240 64.326 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03458 K00128 - gmx:100800699 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03458 3 57843613 57851692 Lapu3g03458 3 57843613 57851692 ECH