Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03441 ATGCAAGGCTGTGAGGTTGAGGCCATTGGCATAAACTACACCATCCACACACACAAATCGGAGCACCCTTTTAAAATCTTCAGCAAATCTGCACAACTTGACCCTGAACAAGATGGTAAAGAGCCAGAAGAGGAAGCAGAAGCTGAACAAAGTTGCAGCGGAGTAAGGCATGTACTGAAGAATGTGAGTTTCCAAGCCAAACCATGGGAGATCCTAGCAATTGTTGGGCCAAGTGGAGCTGGCAAATCATCCCTGCTTGAGATTATAGCTGGCAAACATAGCCCTCAAAGTGGTACTGTGTTGGTGAACCACAAGCCTGTGGACAAAGCTCAGTTCAGGAAGCTTTCAGGGTATGTGACACAAAAGGACACTTTGTTTCCTTTGCTTACAGTTGAAGAAACCCTGATGTTTAGTGCAAAGCTGAGGCTGAAGCTTTCTCAGGATGAAATTTGCTCCAGGGTCAAGTCCTTGATTAAGGAGCTTGGACTTGACCACGTTGCTGGCACTAGAATTGGCGATGATAGGGCCCGAGGCATATCTGGTGGTGAGAGGCGCAGAGTTTCCATTGGTGTTGAAGTCATCCATGATCCAAAAGTGCTGATTCTTGATGAACCAACTTCAGGGCTTGATAGTACTTCAGCTTTGCAAATAATTGACATGCTGAAGGTTATGGCTGACACAAGAGGGAGAACTATAATCCTTAGTATCCATCAACCTGGGTTCCGAATAGTGAAGCTGTTCAATTCATTGTTGTTGTTGGCCAATGGAAGTGTTTTGCACCATGGAACTGCTGAGTTGCTTGGTGTCAATCTAAGGCTGATCGGTTTGGAGCTTCCTCTTCATGTCAATGTAGTTGAATTTGCCATTGAGTCCATTGATGCCATTCAGCAACAACAGAAATGTGAGCCAGTTCTGGTGGAAACTCCAAGGCAATTGCCAGGGACAATGCAAAAGAAGAAAGTTGATGATGAAGCTGGTGAGATTAAGAATGGTAAGTTTACTTTGCAACAGCTGTTTCAACAATCCAAGGTAATTGATGAAGAAACCATCTATGTTGGAAAGGATTTCACTTGTGATTTTGCTAATTCTAGATTGAGAGAAACTATGATTCTCACTCATAGGTTCTCCATGAACATATTTCGTACAAAGGAGCTATTTGCTTGTAGGACAATTCAGATGCTGGTTTCTGGGTTGGTTGTGGGTTCCATCTTTTGTAACCTCAAGGATGATTTAGAGGGAGCTTATGAAAGGGTGGGTTTATTTGCGTTCATATTAACGTTTTTATTGTCAAGCAGCATAGAAGCTCTACCCATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAAACATCTTGTGGAAGCTACCGTGTGTCATCCTATGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTTCTCATCCTAGCCATTTTGTTCTCAATGCCCTTGTACTGGCTTGTTGGTCTCAACCGGAATTTCTTGGCCTTTTTGCACTTTTTGTTGCTCATATGGCTGATCCTTTACACGGCCAATTCAGTTGTGGTGTGTTTTAGTGCTCTGGTGCCTAATTTTATTGTTGGGAATTCAGTGATTGCTGGTGTTATAGGGTCATTCTTCTTGTTCTCTGGGTACTTCATATCAAAGCAAGAAATTCCAAATTACTGGATTTTCATGCATTATATATCCTTGTTTAAGTATCCCTTTGAAGGGTTCCTGATTAACGAGTTCTCCAACTCGGGGAAGTGCTTGGAGTACATGTTTGGGGCGTGTCTTAAGAGCGGAGAGGATGTGCTTGAAGAAGAAGGGTACGGGGGAGAGAGTAACAGATGGAAGAATGTTGGGGTCACTGTGAGCTTCATCTTGGTTTACAGATTCATCTCTTATGTTATTCTTAGATACAGATGTTCCCAAAGGCGATTTGGCAAGTTTATCACCAGCTAA 1941 0.4281 MQGCEVEAIGINYTIHTHKSEHPFKIFSKSAQLDPEQDGKEPEEEAEAEQSCSGVRHVLKNVSFQAKPWEILAIVGPSGAGKSSLLEIIAGKHSPQSGTVLVNHKPVDKAQFRKLSGYVTQKDTLFPLLTVEETLMFSAKLRLKLSQDEICSRVKSLIKELGLDHVAGTRIGDDRARGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLFNSLLLLANGSVLHHGTAELLGVNLRLIGLELPLHVNVVEFAIESIDAIQQQQKCEPVLVETPRQLPGTMQKKKVDDEAGEIKNGKFTLQQLFQQSKVIDEETIYVGKDFTCDFANSRLRETMILTHRFSMNIFRTKELFACRTIQMLVSGLVVGSIFCNLKDDLEGAYERVGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSMPLYWLVGLNRNFLAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKQEIPNYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGACLKSGEDVLEEEGYGGESNRWKNVGVTVSFILVYRFISYVILRYRCSQRRFGKFITS* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03441 646 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524|GO:0016887
Lapu3g03441 646 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 43 626 - -
Lapu3g03441 646 FunFam ABC transporter G family member 5 44 304 - -
Lapu3g03441 646 Pfam ABC transporter 59 207 IPR003439 GO:0005524
Lapu3g03441 646 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 280 IPR003439 GO:0005524
Lapu3g03441 646 Pfam ABC-2 type transporter 368 576 IPR013525 GO:0016020|GO:0140359
Lapu3g03441 646 SMART AAA_5 68 257 IPR003593 GO:0016887
Lapu3g03441 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 265 IPR027417 -
Lapu3g03441 646 Gene3D - 47 301 IPR027417 -
Lapu3g03441 646 CDD ABCG_EPDR 53 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03441 Lapu-Chr3 57689625 57693360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03441 58 291 Calmodulin-binding Proteins AT2G36910 27.642 5.02e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03441 K05681 - gmx:100789722 1150.96