Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03439 ATGATGGCTTGTGGAAGTGTCAACCTTCCTCCTGGCTTTTGCTTCTCTCCAACTGATGAAGAACTTCTCCTTCATTTTCTTTATCCCAAGACCTCTCTACCATGCCATCCCAACATCATTCCAGAGCTTGACCTCTCTCTGCATGATCCATGGGAGTTAAATGGTAAAGCGTTGTCAAGTGGAAATCAACACTATTTCTTCACCCGAGTGAAGGAAAACAGATCCACAGAAAATGGGTATTGGAAGGAAATAGGAGTCACAGAACCAATAGTATCTGCATCTGAAAAAGTGGGGATGAAGAAGTACCTTGTGTTCAACCTTGGTGAAGCTCCACAAGGCACTGAAACCAGTTGGGTCATGCAAGAGTATCATATTTGCTCATCCAGTTTTAGCACTGCATCTTGTGGAAGTACTCGCGGAAGAAGAAAATCTGATCAATGTAGGAGCAAATGGGTTTTGTGCAAAGCCTATGAGAAGAAAAGTTCTCAATCCCAACAAGGTGTAAATTGTTACAACGATGAAAATGACAGTGGAACTGAGCTTTCATGGCTAGATGAATTTTATATGTCATTAGATGATGACCTTGAAGAAGTTATGAGCTTCCCAAATAATTAG 615 0.413 MMACGSVNLPPGFCFSPTDEELLLHFLYPKTSLPCHPNIIPELDLSLHDPWELNGKALSSGNQHYFFTRVKENRSTENGYWKEIGVTEPIVSASEKVGMKKYLVFNLGEAPQGTETSWVMQEYHICSSSFSTASCGSTRGRRKSDQCRSKWVLCKAYEKKSSQSQQGVNCYNDENDSGTELSWLDEFYMSLDDDLEEVMSFPNN* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03439 204 PANTHER NAC TRANSCRIPTION FACTOR 56 9 174 - -
Lapu3g03439 204 Pfam No apical meristem (NAM) protein 10 125 IPR003441 GO:0003677|GO:0006355
Lapu3g03439 204 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Lapu3g03439 204 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lapu3g03439 204 Gene3D NAC domain 18 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03439 Lapu-Chr3 57674690 57676018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03439 2 163 NAC Transcription Factor Family AT1G61110 42.197 7.67e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu3g03439 NAM 3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03439 - - gmx:100779578 380.178