Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03434 ATGCCGGCATGGTGGAGTAGAAAGTGGAGCAAGAGCAAGGAGGAGCACGAGGAGGCCGAGGAGGAGGATGAGGAAGAGCCACGTGGCGGCTTTCAGTTGAGTTTCATGAAATCTCCTGTCGCCGTTCGGAGGGGTGACCAGAGTAAGAGTAAGAGGAACAAGAAGAAGCCCAAGAGCTTCGACGAGAAGCTCAAAGGGGTTCCGTTGCCTCGTCCGACGCACTGTCACAGCGATCAAATTCAAACCTTTGGATCTCTCTCGGTCTCGGGTTCCAGCGTCAGCTCCTCCACCTCCTTCGACGATCACCCAATTTCGCCTCATTTTAGTGCCAACAGAGGACAAGATGAGGTGAGGTTCAATGCAAGGTCAAAAAGTCCTGGTCCTGGGTCAAGAGGACCTACTAGTCCTACCTCGCCGCTTCATCCAAGGTTGCATGCTTTGAGCCTTGACTCTCCTACTGGAAAGCAAGACGAGGGAAGGAGCGAGTGTCATCCGTTGCCTCTTCCACCTGGCTCTCCAACTAGTCCTTCTTCTGTGCTTTCCAATTCCATCACACGACCAAATGGACTGTTGGAACATGCTACGAGCAATGTGTCCAAATGGAGAAAAGGAAAGCTTCTAGGACGAGGAACATTTGGGCACGTGTATCTGGGATTCAATAGTGAAAATGGACAAATGTGTGCAATAAAAGAAGTCAAGGTTGTCTCTGATGATCAAACATCAAGAGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTAAATCAGCTTTCACACCCCAATATTGTTCAATACTATGGGAGCGAACTGGTAGAAGAATCACTTGCCGTATATTTGGAATTTGTCTCAGGCGGTTCTATCCAAAAATTACTTCAGGAGTATGGTGCATTTAAGGAGCCTGTTATTCAAAATTATACCAGGCAGATTGTCTTTGGACTTGCCTATCTGCATGCAAGAAATACGGTACACAGGGATATTAAAGGGGCAAACATACTAGTTGATCCTAATGGTGAAATCAAACTGGCCGACTTTGGAATGGCTAAACATATAAATTCTTCTGCCTCAATGCTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTGATGAATACAAATGGCTATAGTCTTCCGGTTGATATATGGAGCTTGGGATGCACAATTATTGAAATGGCAACATCTAAACCTCCATGGAATCAGTATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATCCCTGAGCATCTTTCCAATGAAGCAAAGAATTTCATCAAGCTATGCTTACAAAGAGACCCATCAGCTCGCCCAACCGCCCAATACTTACTAGACCACCACCCCTTCATTCAAGATCAATCAGCAACAAGAGCTGCAAATGTCAGCATAACCAGGGATGCTTTCCCTTACATGTTTGATGGAAGCCGGACACCGCCTGTGCTAGAGTCCCATTCCAACCGAACAAGTATAACTTCGCTTGATGGAGATTATGCATCAAAGCCAGCTCTTGCAACCCCACGTGCTTTAAGAAGTCCAAGAGATAACACAAGAGTGATCACATCATCTTTACCGGTATCTCCCTCTTCAAGTCCATTGCGACGGTATGGGCCAACGCAGCAGGGCTGTTTCTTTTCTCCTCCTCATCCAGCTTACACAGTAATGGCACAAAGTAGTTACACTTTGAATGACATATGCTCGTATCCCATGAGGTCAAATGCCACGTTGACTCTTGATCCTTGGCATGAAACATCTCGGTACAAAGCCAATACACCACCTGGTGGATCTCCAAGAATGAGACTCATTTGA 1830 0.4607 MPAWWSRKWSKSKEEHEEAEEEDEEEPRGGFQLSFMKSPVAVRRGDQSKSKRNKKKPKSFDEKLKGVPLPRPTHCHSDQIQTFGSLSVSGSSVSSSTSFDDHPISPHFSANRGQDEVRFNARSKSPGPGSRGPTSPTSPLHPRLHALSLDSPTGKQDEGRSECHPLPLPPGSPTSPSSVLSNSITRPNGLLEHATSNVSKWRKGKLLGRGTFGHVYLGFNSENGQMCAIKEVKVVSDDQTSRECLKQLNQEINLLNQLSHPNIVQYYGSELVEESLAVYLEFVSGGSIQKLLQEYGAFKEPVIQNYTRQIVFGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSASMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTIIEMATSKPPWNQYEGVAAIFKIGNSKDMPEIPEHLSNEAKNFIKLCLQRDPSARPTAQYLLDHHPFIQDQSATRAANVSITRDAFPYMFDGSRTPPVLESHSNRTSITSLDGDYASKPALATPRALRSPRDNTRVITSSLPVSPSSSPLRRYGPTQQGCFFSPPHPAYTVMAQSSYTLNDICSYPMRSNATLTLDPWHETSRYKANTPPGGSPRMRLI* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03434 609 Gene3D Transferase(Phosphotransferase) domain 1 198 478 - -
Lapu3g03434 609 MobiDBLite consensus disorder prediction 75 104 - -
Lapu3g03434 609 FunFam Mitogen-activated protein kinase kinase kinase 199 482 - -
Lapu3g03434 609 ProSitePatterns Protein kinases ATP-binding region signature. 207 230 IPR017441 GO:0005524
Lapu3g03434 609 ProSiteProfiles Protein kinase domain profile. 201 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03434 609 Pfam Protein kinase domain 202 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03434 609 MobiDBLite consensus disorder prediction 1 185 - -
Lapu3g03434 609 CDD STKc_MEKK1_plant 200 458 - -
Lapu3g03434 609 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 44 466 - -
Lapu3g03434 609 MobiDBLite consensus disorder prediction 55 69 - -
Lapu3g03434 609 SMART serkin_6 201 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03434 609 SUPERFAMILY Protein kinase-like (PK-like) 199 539 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03434 Lapu-Chr3 57607425 57613850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03434 1 521 MAP Kinase Kinase Kinase AT1G53570 57.274 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu3g03434 Pkinase 3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03434 K04421 - gmx:100787064 928.317