Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03415 ATGAGTTTGGAGGGGACAGAAAGTTCAGAAGAGGGTGCCAGTTATCTGGAGCCTCCTGATCCTGACTTTGTTGAAATTGATCCTACTTGCACCTACATCAAGGTTCAGATTGATGAGGTGTTACAGTCTCCCGGTGACTTAGATAGGCTATATTCAGAATTGCACCTCTTAAGATCACTGAAGCACAGTAACATAGTGAGATTCTACAATTCCTGGATCGATGACAGGCGCAAGACCGTTAATATGATCACGGAGTTGTTTACCTCGGGTAGCCTCAAACAGTTTCGTAAAAAACACAAGAAGGTTGACTTGAAGGCCGTTAAAGGATGGGCAAGACAAATTTTAATGGGTCTAAACTATCTCCACGGTCACAACCCACCAGTTATCCATAGGGACCTGAAGTGTGATAATATATTTATCAATGGTCACCAAGGAGAAGTTAAAATTGGAGATCTTGGGCTGGCAACTTTCTTGGATCGAAGAACCCCGGAGTTTATGGCACCTGAGCTGTATGATGAAAATTACAATGAATTAGCTGACATATATTCGTTTGGTATGTGCATGCTTGAGTTGGTGACGTCTGAGTATCCTTATAGTGAATGCAGAAACTCGGCCCAGATATATAAGAAAGTTTCATCCGGTATAAAACCTGTTGCTCTTTCTAAAGTGTTAGATCCAGAAATGAAATCATTTATTGAGAAATGTCTAGTCCCAGCATCTCAAAGATTGTCAGCCAAGGAGCTTCTGATGGACCCGTTTCTTCAAATGAATGCTTCAACAAAGAAGGGCCCTTTTCCATTGCCGCATATTGTTCTTCCCAAATTGGGAGCCTCTGAAAGTCGTTGTATGGTGTCTGAAGGTCCTGCTACTGCACGTAACGGAGACATTTCTATGAATCTTGGTGACACCAGTGAGCTTCCAGTGATCACTATATTTGATAAATCCACTGATGATGCATCATGTTCTACAAGTGTTGAGATAAGGAGGCAGAAGAGAGGTGATATTTTCTTTCTAAAAGGTGAAGAAAATGATAAGAACTCTGTATCATTGGTCCTGCGGATAGCTGATCAAGGTGCACGAGCAAGAAATATCCATTTCATATTCTACCTTGACACTGACACTGCTGTCTCAGTTTCAAGCGAAATGGTTGAGCAACTTGAACTTACTGATCATAATGTTAAATTCATAGCTGAGTTAATAGATTTGTTATTGATGAATCTGGTTGCTGACTGGAAACCCTGTGTATCAATTGATCACTTGGTTTCTCCTAGTAATAAACAAACTCTTGTGAGTCGACAGGGAGAGTTGAAGTTGGCAAACTGCAAAGGAAGCTCAAAAGATTCGACTGAAGATTTAGGTCCCTCTACCTCATCTGCAACATTAGCTGCAAAAGAAAACCTTGATAATATGGATATCGATGGGGCTTTATCTGACGAGTGCGCTGGTCTTCAGAAAGCAACCAAGGCAGATGATCTATGCTCTGAGAAGTCGTATACATCTGCAAAAACTGACTTCAATGATAATAAGTTTTCTACGGTTTCATTTATGTCTGCTGAATCAGAATTTGATGGAGGGAGTCAATCTTCATCTGCATCTGAAATTGGGGCATCATCTGATTGTAAGAGCAAGTTTTTGGACATGGAAAGCTTCTCTAATAGTCTGAACATTGTCTCCTCCTCGTCTGAACCTGAGGGTGAGTTGAAATTAGAGTTAGAAATGATTGAACAGAAGTATCAGGAGGCAATGAATGATTTGTACCAAAGAAGATACGAGGCCATCTTGGAGATTAGAAGGAGAATGTCAGAAAAGATGGCATCATAG 1821 0.408 MSLEGTESSEEGASYLEPPDPDFVEIDPTCTYIKVQIDEVLQSPGDLDRLYSELHLLRSLKHSNIVRFYNSWIDDRRKTVNMITELFTSGSLKQFRKKHKKVDLKAVKGWARQILMGLNYLHGHNPPVIHRDLKCDNIFINGHQGEVKIGDLGLATFLDRRTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSKVLDPEMKSFIEKCLVPASQRLSAKELLMDPFLQMNASTKKGPFPLPHIVLPKLGASESRCMVSEGPATARNGDISMNLGDTSELPVITIFDKSTDDASCSTSVEIRRQKRGDIFFLKGEENDKNSVSLVLRIADQGARARNIHFIFYLDTDTAVSVSSEMVEQLELTDHNVKFIAELIDLLLMNLVADWKPCVSIDHLVSPSNKQTLVSRQGELKLANCKGSSKDSTEDLGPSTSSATLAAKENLDNMDIDGALSDECAGLQKATKADDLCSEKSYTSAKTDFNDNKFSTVSFMSAESEFDGGSQSSSASEIGASSDCKSKFLDMESFSNSLNIVSSSSEPEGELKLELEMIEQKYQEAMNDLYQRRYEAILEIRRRMSEKMAS* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03415 606 Pfam Protein kinase domain 44 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03415 606 Coils Coil 564 584 - -
Lapu3g03415 606 Gene3D Phosphorylase Kinase; domain 1 22 85 - -
Lapu3g03415 606 ProSiteProfiles Protein kinase domain profile. 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03415 606 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 34 597 - -
Lapu3g03415 606 SUPERFAMILY Protein kinase-like (PK-like) 33 285 IPR011009 -
Lapu3g03415 606 Gene3D - 346 430 - -
Lapu3g03415 606 MobiDBLite consensus disorder prediction 1 21 - -
Lapu3g03415 606 FunFam probable serine/threonine-protein kinase WNK9 87 259 - -
Lapu3g03415 606 Gene3D Transferase(Phosphotransferase) domain 1 87 262 - -
Lapu3g03415 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Lapu3g03415 606 SMART serkin_6 23 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03415 Lapu-Chr3 57364431 57367195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03415 104 428 MAP Kinase Kinase Kinase AT1G49160 64.759 1.27e-158 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu3g03415 Pkinase 3.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03415 K08867 - gmx:121175054 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03415 3 57364431 57367195 Lapu3g03415 3 57364431 57367195 ECH