Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03414 ATGGAGTTCCTGGACGAGGACGCGAGGCCAAGGTTCGTGTTCCAGTCCGGTGCCGTCTCGAGCACCGAACCACCACACCCGAACCACAAACCTACAAAGCCGTTCCTCTTCGTCACTGTTTCTCTCTCTTCGCTCTTCCTTGCTCTCTCTCTATTCTTCCTCGAATCCGAACCCTTCAAATCGCTCCTCTTCTGGCTCGCGCTCTCTCTTCTCGTTGGCCCCTTCGCTCCCCCCTCCCTCACCGGCGGCGACATCCGCGTCGGCCTCGGCGAGGTCGTCAGCTTCCCTGATCCGGAGCCCGAAACCGACGACGACAGGAAGCCTCAGCAGCGGCGATCCAGACAGCGGAGGCCCGAGGAAGTCTCCGCCGTCGGTCCAGTGGTGTCCGTCAGCGCGCCGGAGAAGCGGGGTGGAGGCGGCGGAGTGGAGAAGGTTTCGACGGTGGTGGAGGAGAAGGAGTGGAGCGAGGAGGATGTAGAGATGCTGAAGAAGCAGTTGGCGAAGAATCCGGTGGGGAAGCCGGGGCGGTGGGAGGCGATAGCGGCGGCGTTCGGCGGAAGGCACGGTGTGGAGAGTGTGATAAAGAAGGCGAAGGAGTTGGGGGAGAAGAAAGTAGATGATTCGGACTCTTACGCGTTGTTCTTGAAGAAGAGGAAGGCTTTGGATAAGAGGGTTGTGGAGGAGAATGGGGGTGAGGATTCGGTGACGGTGGAGAAAGCTGTTGATAATGGTTGGAGTTCTGGTGAGGATATAGCGTTGCTGAATGCATTGAAAGTGTTTCCTAAGGATATTTCAATGAGGTGGGAGAAGGTTGCTGCGGCCGTTCCCGGTAGATCCAAAGCGGCTTGCATGAGAAGATTTGCTGAATTGAAGAAAGGGTTTCGGAGTGCAAAAGCTGCAGCCGAGTGA 909 0.5765 MEFLDEDARPRFVFQSGAVSSTEPPHPNHKPTKPFLFVTVSLSSLFLALSLFFLESEPFKSLLFWLALSLLVGPFAPPSLTGGDIRVGLGEVVSFPDPEPETDDDRKPQQRRSRQRRPEEVSAVGPVVSVSAPEKRGGGGGVEKVSTVVEEKEWSEEDVEMLKKQLAKNPVGKPGRWEAIAAAFGGRHGVESVIKKAKELGEKKVDDSDSYALFLKKRKALDKRVVEENGGEDSVTVEKAVDNGWSSGEDIALLNALKVFPKDISMRWEKVAAAVPGRSKAACMRRFAELKKGFRSAKAAAE* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03414 302 MobiDBLite consensus disorder prediction 99 119 - -
Lapu3g03414 302 CDD SANT 153 200 IPR001005 -
Lapu3g03414 302 SUPERFAMILY Homeodomain-like 241 291 IPR009057 -
Lapu3g03414 302 ProSiteProfiles Myb-like domain profile. 245 291 IPR001005 -
Lapu3g03414 302 CDD SANT 245 291 IPR001005 -
Lapu3g03414 302 MobiDBLite consensus disorder prediction 91 144 - -
Lapu3g03414 302 ProSiteProfiles SANT domain profile. 240 295 IPR017884 -
Lapu3g03414 302 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 147 300 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Lapu3g03414 302 Gene3D - 238 302 - -
Lapu3g03414 302 SUPERFAMILY Homeodomain-like 152 191 IPR009057 -
Lapu3g03414 302 Gene3D - 148 206 - -
Lapu3g03414 302 SMART sant 150 203 IPR001005 -
Lapu3g03414 302 SMART sant 241 293 IPR001005 -
Lapu3g03414 302 FunFam Myb family transcription factor 239 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03414 Lapu-Chr3 57362673 57363835 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu3g03414 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03414 - - gsj:114413206 419.853