Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu3g03411 | ATGTATGCTTCAACTTCCTTTACTTCACAATTGGTCCATGACCTTCTCATGGACTCAAGCTCAAGAAAGCTACTCCTTCAAGACCCACTTCATCAATCAATCAACTCACCTGACTTAGCCAAATCCCCAGATTCCATGATTTACAACTCAACGGACTCATATTTCAAAGGTCGTGACTTCGACGCAAATGTTGTCATGATACTCTCAGTCCTCTTGTGTGCTGTTATTTGCTCACTCGGCTTGAACTCCATCATAAAGTGTGTCTTGAGGTGCTCAAACATAGTCATCAACGACCCTTCAAGTGTGAGCTACAACCCTTCCCCACGATTGGTCAACACAGGAATCAAGAAGAAAGCCCTCAAGACTTTTCCTACCGTGAGCTACTCCACAGAGTTGAAACTCCCAGGTTTGGACACAGAGTGTGTGATATGCCTCTCAGAGTTTGTCAATGCTGATAAGGTACGCATTTTGCCAAAATGCAACCATGGTTTCCACGTTCGCTGCATTGACAAATGGCTAAGTTCGCACTCATCATGCCCCAAGTGCAGACAGTGCCTCATTGAGACTTGTAAGAAAATTGTTGGAACCCAACCACCAGTACCACCAGTGCCAGAAACCATTATAAGGATCCAACCACTAGAACCTGAAGGTTTGGAGCGTAACTATAGGGAAGTATGCTAG | 681 | 0.4479 | MYASTSFTSQLVHDLLMDSSSRKLLLQDPLHQSINSPDLAKSPDSMIYNSTDSYFKGRDFDANVVMILSVLLCAVICSLGLNSIIKCVLRCSNIVINDPSSVSYNPSPRLVNTGIKKKALKTFPTVSYSTELKLPGLDTECVICLSEFVNADKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCKKIVGTQPPVPPVPETIIRIQPLEPEGLERNYREVC* | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu3g03411 | 226 | CDD | RING-H2_EL5-like | 140 | 183 | - | - | |
Lapu3g03411 | 226 | PANTHER | RING-H2 FINGER PROTEIN ATL78 | 17 | 217 | IPR044602 | GO:0016567|GO:0016740 | |
Lapu3g03411 | 226 | SMART | ring_2 | 141 | 182 | IPR001841 | - | |
Lapu3g03411 | 226 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 105 | 187 | IPR013083 | - | |
Lapu3g03411 | 226 | SUPERFAMILY | RING/U-box | 119 | 189 | - | - | |
Lapu3g03411 | 226 | ProSiteProfiles | Zinc finger RING-type profile. | 141 | 183 | IPR001841 | - | |
Lapu3g03411 | 226 | Pfam | Ring finger domain | 140 | 183 | IPR001841 | - | |
Lapu3g03411 | 226 | FunFam | RING-H2 finger protein ATL73 | 104 | 188 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu3g03411 | Lapu-Chr3 | 57328924 | 57329604 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu3g03411 | 60 | 187 | C3H Transcription Factor Family | AT3G10910 | 50.376 | 1.67e-40 | 135 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu3g03411 | K19040 | - | gmx:100527126 | 402.519 |