Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03410 ATGTCTGCCATGAACTCTAGTGTCTTGGCCTGTAACTATGCCAGATCAGGAAGCTCCGACCTCAATGCCAAGCTCACTTCCATGCCTTCGGTTGCATCTCCACCACTATCTGGTCTCAAGTTACCCATGATCAAGGCTCATCAAGCAAAAGTTGCTGAATCTAAATCAAACCAAGGAAGGAGAAGTGCTCTTGTCTACTTGGCAGCTACCCTTTTCACTGCTGCAGCTGCTGCTTCCAACTCTCAAGCCAATGCTGGAATCATTGAAGAATACCTTGAAAAGAGCAAGACCAACAAGGAACTTAATGACAAGAAAAGGTTAGCTACAACTGGAGCCAATTTTGCAAGAGCATACACTGTAGAATTTGGCACTTGCAAGTTCCCTGAAAACTTCACTGGTTGCCAAGATCTAGCTAAGCAAAAGAAAGTGCCATTTCTTTCTGATGATCTGGACCTAGAATGTGAAGGAAAGGACAAATACAAGTGTGGTTCTAATGTTTTCTGGAAATGGTGA 513 0.4366 MSAMNSSVLACNYARSGSSDLNAKLTSMPSVASPPLSGLKLPMIKAHQAKVAESKSNQGRRSALVYLAATLFTAAAAASNSQANAGIIEEYLEKSKTNKELNDKKRLATTGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFLSDDLDLECEGKDKYKCGSNVFWKW* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03410 170 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 170 IPR008796 GO:0009522|GO:0015979
Lapu3g03410 170 Gene3D - 86 170 IPR044907 -
Lapu3g03410 170 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 43 170 IPR008796 GO:0009522|GO:0015979
Lapu3g03410 170 FunFam Photosystem I reaction center subunit N 86 170 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03410 1 141 Calmodulin-binding Proteins AT5G64040 61.806 2.23e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03410 K02701 - cave:132166062 257.299