Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03404 ATGAAAGGAAACAAGCCTTATCTAGTTGTGATCCTCATACAAGCCATCTACACTGCTATGTTTCTGCTCTCGAAAGCAGCATTCGACCATGGCATGAACAATTTCATCTTTGTCTTCTATAGACAGACCGCAGCCACCATATTCCTCATCCCTTTCGCTTTCTTCTTTGAATGGAAAACTGCACCCCCTTTGTCATTCGTGACCTTCTGCAAGATCTTTTTCCTTTCTTTACTGGGGATCACTGCCAGCTTGGACATATATGGTATTGCCCTTATTTACACTTCTGCTACTTTGGCTGCTTCTATTACAAACTGTCTCCCAGTCATCACCTTCTTCTTAGCACTCCTGCTCAGGATAGAAGTTTTGCAACTAAAGAGTGCCTCTGGTGCTGCTAAGTTGGTTGGAATAGTGGCATGCTTAACTGGAGCAGCAATCCTTGCTTTCTATAAAGGTCCTCATTTGGAACTTTTAACACATTATCACCTTTTAGGGTATCATAAAAGCCAACAACACCTGGGTCATGTTGCATCTCATTCATGGATTAAGGGTTGCTTCCTCATGCTCCTCTCCAGCACCTTTTGGGGAATGTGGCTTGTGCTACAGACTTTTGTCATAAAAGGCTACCCTTCAAAGTTGCTCCTCACAACTCTTCAGTGTTTCTTAAGCTCGATTCAGTCTTTAGGGATTGCCTTGGCAGTAGAAAGAGACATTGAGCAATGGAAATTGGGGTGGAATGTCAGACTCCTTGCTGTTGTGTATTGCGGAATTATGGTGACTGGTGTAACATATTACTTACAAGCATGGGTTATAGAGAAGAAAGGACCAGTGTTTCTGGCCATGGCAACACCATTGGCTCTTATCATGACCATCTTCTCCTCCACATTTATCTTGGGCGAGATAATAAATTTGGGAAGCCTTTTAGGTGGGATCGCTTTGGTCATTGGACTCTACTGCGTGCTGTGGGGGAAGAGCAGAGAGGAAATGACAAAAGCTTCCAAAGATTTGGAGGAGGGATCAAGTTAG 1023 0.436 MKGNKPYLVVILIQAIYTAMFLLSKAAFDHGMNNFIFVFYRQTAATIFLIPFAFFFEWKTAPPLSFVTFCKIFFLSLLGITASLDIYGIALIYTSATLAASITNCLPVITFFLALLLRIEVLQLKSASGAAKLVGIVACLTGAAILAFYKGPHLELLTHYHLLGYHKSQQHLGHVASHSWIKGCFLMLLSSTFWGMWLVLQTFVIKGYPSKLLLTTLQCFLSSIQSLGIALAVERDIEQWKLGWNVRLLAVVYCGIMVTGVTYYLQAWVIEKKGPVFLAMATPLALIMTIFSSTFILGEIINLGSLLGGIALVIGLYCVLWGKSREEMTKASKDLEEGSS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03404 340 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Lapu3g03404 340 Pfam EamA-like transporter family 5 134 IPR000620 GO:0016020
Lapu3g03404 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 325 - -
Lapu3g03404 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Lapu3g03404 340 PANTHER WAT1-RELATED PROTEIN 5 328 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03404 Lapu-Chr3 57290358 57293940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03404 1 254 Nodulin-like Gene Family AT5G64700 62.791 2.54e-100 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03404 - - gmx:100796986 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03404 3 57290358 57293940 Lapu9g01161 9 25140213 25144051 PCT