Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03383 ATGTCAACAACTTCCCATACCATGGCTCACCACAGCTTATTTGAGGAGCAGGATCAGATTCCTACACAGATGGGGTTCTTTCCCTTTTCAACAAACCTTACCTTCCCTCCTTTGGGTTGCCACCAATCCTCTTTGAAGGCCTTCAGCTCCATAGCACCTTCTCCACTTGCAATATCTCAACAAGATTCTACATCAAATCTAACAGAAACCCTATTTCAGAAGTCAAGAGAAGACCTCACTTCTAACTTTGGAGGAGCTCAATTCCTGTCCTTGCATAGATCCAGTCTAAATCCATGGGCATTGGGAGAAGGGACTGATTGCTTCAGCAGTAAAAGAAGTGGATTTGATGATCATCATCTGGGAATTTCAGCCATGAAGATGAAGAAAATCAAGGCAAGAAGGAAGGTTAGAGAGCCTAGGTTTTGCTTCAAGACTATGAGCGATGTGGATGTATTGGACGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTTGTGAAGAACACACAGCACCCCAGAAGCTATTATCGTTGCACACAAGATAATTGTCGAGTAAAGAAACGCGTGGAACGCTTAGCGGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGTTCACTCTCCATCAAATGATCTTGAAGACTCTTCATCTCCATCTCAACTTGGGAACTTCTTATGGTAG 690 0.4391 MSTTSHTMAHHSLFEEQDQIPTQMGFFPFSTNLTFPPLGCHQSSLKAFSSIAPSPLAISQQDSTSNLTETLFQKSREDLTSNFGGAQFLSLHRSSLNPWALGEGTDCFSSKRSGFDDHHLGISAMKMKKIKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSSSPSQLGNFLW* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03383 229 MobiDBLite consensus disorder prediction 214 229 - -
Lapu3g03383 229 MobiDBLite consensus disorder prediction 204 229 - -
Lapu3g03383 229 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03383 229 SUPERFAMILY WRKY DNA-binding domain 144 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g03383 229 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03383 229 Gene3D WRKY domain 139 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g03383 229 ProSiteProfiles WRKY domain profile. 147 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03383 229 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 213 IPR044810 GO:0003700
Lapu3g03383 229 FunFam WRKY transcription factor 57 138 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03383 Lapu-Chr3 57097246 57099472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03383 122 229 WRKY Transcription Factor Family AT4G39410 77.876 8.38e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu3g03383 WRKY 9.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03383 - - pvu:PHAVU_002G266400g 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03383 3 57097246 57099472 Lapu3g03383 3 57097246 57099472 ECH