Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03381 ATGGGTCCCTTTACACTGTCCGTTATGGTTAATGACTCTGCCATTTCATTACCAGATGCTTGTTCGAAGAGAAAACAGAAATTGCTTTTGAAAAATTCTTTTGCATCAGTTAGCATGGGAGATGAAAAGCCTTTTGACTTCTTACGCACTTTATTTGAGGGCGTTATTGCAGGAGGTACAGCTGGAGTTGTTGTTGAAACAGCTTTATACCCAATCGATACTATTAAAACACGTCTGCAGGCTGCTCGCGGAGGAGAAAAACTAATATTGAAAGGCCTTTATTCCGGATTGGCTGGGAACCTTGCTGGTGTCTTACCGGCATCTGCATTATTTGTGGGAGTTTATGAACCTATAAAGCAGAAATTGCTGAGGATATTTCCTGAAAATCTGAGTGCTCTCAGTCATTTGACTGCAGGTGCCATAGGGGGCACTGCAGCTTCATTGATTCGTGTTCCAACAGAGGTTATCAAGCAACGAATGCAAACTGGGCAGTTTACTTCAGCTTCTGGGGCTGTTCGCTTTATTGCTTCTAAGGAAGGCTTTAAAGGATTTTATGCTGGGTATGGATCTTTTTTGTTGCGAGATTTACCCTTTGATGCTATCCAATTTTGCATCTATGAGCAGATTCGAATAGGTTATATGCTTGCGGCACGAAGAAATCTGAATGATCCTGAAAATGCAATTATTGGTGCTTTTGCAGGTGCACTAACTGGAGCTATAACTACCCCCCTTGATGTCATCAAGACAAGGTTAATGGTTCAAGGATCTGCAAACCAATACAAGGGAATTGCTGACTGTGTTCAAACCATTATTAAGGAAGAAGGACCTCGTGCCTTTTTGAAGGGTATTGGTCCAAGAGTACTATGGATAGGCATAGGTGGTTCAATATTCTTTGGTGTCCTCGAGAGTACCAAACGTTTTCTTGCTGAGAGGCGTCCTACAGTGTCTCAGCACACAGACAAAAGTAAAGATAAATAG 978 0.4202 MGPFTLSVMVNDSAISLPDACSKRKQKLLLKNSFASVSMGDEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLILKGLYSGLAGNLAGVLPASALFVGVYEPIKQKLLRIFPENLSALSHLTAGAIGGTAASLIRVPTEVIKQRMQTGQFTSASGAVRFIASKEGFKGFYAGYGSFLLRDLPFDAIQFCIYEQIRIGYMLAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMVQGSANQYKGIADCVQTIIKEEGPRAFLKGIGPRVLWIGIGGSIFFGVLESTKRFLAERRPTVSQHTDKSKDK* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03381 325 Pfam Mitochondrial carrier protein 130 211 IPR018108 -
Lapu3g03381 325 Pfam Mitochondrial carrier protein 51 85 IPR018108 -
Lapu3g03381 325 Pfam Mitochondrial carrier protein 225 310 IPR018108 -
Lapu3g03381 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 121 IPR018108 -
Lapu3g03381 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 212 IPR018108 -
Lapu3g03381 325 SUPERFAMILY Mitochondrial carrier 52 302 IPR023395 -
Lapu3g03381 325 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 32 314 - -
Lapu3g03381 325 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 53 320 - -
Lapu3g03381 325 Gene3D Mitochondrial carrier domain 42 323 IPR023395 -
Lapu3g03381 325 PRINTS Mitochondrial carrier protein signature 54 67 IPR002067 GO:0055085
Lapu3g03381 325 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Lapu3g03381 325 PRINTS Mitochondrial carrier protein signature 67 81 IPR002067 GO:0055085
Lapu3g03381 325 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085
Lapu3g03381 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 307 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03381 Lapu-Chr3 57042704 57051052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03381 128 313 Chloroplast and Mitochondria Gene Families AT1G07030 30.890 5.54e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03381 K15111 - gmx:100811130 590.112