Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03374 ATGGATTTCTTCTACTTTGGAAACCCTCACCCTTCTCATAATCATGTTCACAGCATGCCTCCATCTTCCCCTGAGATCGCACTATCTGATTATCTCCTTCTCGATGATTACCTTGATCATCATCATCATCATCTTCATCATGGAGACTCTCCATCATCACAAAGCACTGAGTCATCGGAAAAAGCAACCTTCAGTGATGCCACTCATGGATTCACCACTGGTGCAACCTCTCAGAACAACAACATGCAAGTAAAGTGCAGTAAACAGATTAAAGGAAGCAAAGCAGTGTTGGGTCCAAGAATCGCGTTTAGAACCAAATCAGAGCTTGAGATCATGGATGATGGATACAAGTGGAGGAAGTATGGTAAGAAGTCCGTGAAGAGCAGTCCAAATCTAAGGAACTACTACAAATGTTCAAGTGGAGGATGCAGTGTGAAGAAAAGGGTGGAAAGGGACAGAGAGGACTACAGCTATGTGATAACAACTTATGAAGGAGTACACAATCATGAGAGCCCTTTTACCACATACTACAGCCCTATCTCCTTCCTACATTCTGATGATTCTACATGTTCCAAATGA 579 0.4266 MDFFYFGNPHPSHNHVHSMPPSSPEIALSDYLLLDDYLDHHHHHLHHGDSPSSQSTESSEKATFSDATHGFTTGATSQNNNMQVKCSKQIKGSKAVLGPRIAFRTKSELEIMDDGYKWRKYGKKSVKSSPNLRNYYKCSSGGCSVKKRVERDREDYSYVITTYEGVHNHESPFTTYYSPISFLHSDDSTCSK* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03374 192 FunFam WRKY transcription factor 57 98 172 - -
Lapu3g03374 192 SUPERFAMILY WRKY DNA-binding domain 104 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g03374 192 Gene3D WRKY domain 97 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g03374 192 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 36 174 IPR044810 GO:0003700
Lapu3g03374 192 SMART WRKY_cls 112 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03374 192 Pfam WRKY DNA -binding domain 113 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03374 192 MobiDBLite consensus disorder prediction 43 78 - -
Lapu3g03374 192 ProSiteProfiles WRKY domain profile. 107 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g03374 192 MobiDBLite consensus disorder prediction 51 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03374 Lapu-Chr3 56992350 56993563 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03374 8 180 WRKY Transcription Factor Family AT5G64810 46.023 2.10e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu3g03374 WRKY 1.3e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03374 - - gmx:100500248 271.937