Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03358 CATAGGAGATTACATTGTAAACTTGACCTTCAAGGGCTAATCAAGCGTATGAAGGGGATGCGCAAAATCTTTGATGAATTCTTTGACAAAGTTATCGATGAGCATATTCAGTCATCAGAGAAGGGGCAGGACAAGGTGAAGGATTTTGTCCACGTCATGTTGGGATTTGTCGGTACTGAGGAATCGGAGTACCGCGTTGAACGGCCCAATATAAAAGCCATATTGCTGGATATGTTGGCTGGCTCCATAGATACTTCTGCTACAGCAATCGAGTGGATACTTTCAGAGCTGCTAAAGAATCCAAGGGTGATGAAGAAACTCCAAAGGGAATTGGAAAGTGTGGTGGGTATGAAGAGGAAGGTGGAGGAATCAGACTTAGAGAAGTTAGAGTATTTGGAGATGGTTATAAAGGAAAGCATGAGGCTGCATCCAGTGGCACCGTTGCTAATACCACACCAGTCCACAGAAGATTGCATGGTTGGAGAGTTTTTGATTCCTGAAAAGTCAAGGGTGATAGTGAATGCATGGGCAATTATGAGAGATGGAAGTGTTTGGGAAGAGGCAGAGAAGTTCTGGCCAGAGAGATTTGAGGGAAGGAGCATAGATGTGAGAGGGCGTGACCAGTTCCAGCTGATACCATTTGGGTCAGGCAGAAGGGGATGTCCAGGAATTCAACTTGCTCTAACTGTGGTTCGTCAAACAGTGGCACAACTTGTCCATTGTTTTGATTGGAAACTGCCAAATGACATGTTGCCAGCTGACTTGGACATGACAGAGGAGTTCGGACTCACAATGCCCTGGGCCAATCATCTTGTTGCCATTCCATCTCAACGCCTTCACCCTCAAAGCGATTGGTGA 858 0.458 HRRLHCKLDLQGLIKRMKGMRKIFDEFFDKVIDEHIQSSEKGQDKVKDFVHVMLGFVGTEESEYRVERPNIKAILLDMLAGSIDTSATAIEWILSELLKNPRVMKKLQRELESVVGMKRKVEESDLEKLEYLEMVIKESMRLHPVAPLLIPHQSTEDCMVGEFLIPEKSRVIVNAWAIMRDGSVWEEAEKFWPERFEGRSIDVRGRDQFQLIPFGSGRRGCPGIQLALTVVRQTVAQLVHCFDWKLPNDMLPADLDMTEEFGLTMPWANHLVAIPSQRLHPQSDW* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03358 285 PRINTS E-class P450 group I signature 90 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 PRINTS E-class P450 group I signature 70 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 PRINTS E-class P450 group I signature 211 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 PRINTS E-class P450 group I signature 221 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 PRINTS E-class P450 group I signature 174 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 PRINTS E-class P450 group I signature 133 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 PRINTS P450 superfamily signature 134 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 PRINTS P450 superfamily signature 81 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 PRINTS P450 superfamily signature 221 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 PRINTS P450 superfamily signature 212 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 Coils Coil 104 124 - -
Lapu3g03358 285 SUPERFAMILY Cytochrome P450 10 275 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 Gene3D Cytochrome P450 5 277 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 Pfam Cytochrome P450 9 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03358 285 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 214 223 IPR017972 GO:0005506|GO:0016705
Lapu3g03358 285 PANTHER CYTOCHROME P450 93A3-LIKE 7 280 - -
Lapu3g03358 285 FunFam Uncharacterized protein 3 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03358 Lapu-Chr3 56852620 56853975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03358 8 279 Monolignol Biosynthesis Gene Families AT4G36220 44.291 1.55e-78 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03358 K20562 - vun:114179959 462.996