Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03356 ATGATTTGGATAGCAATTCTTTTGGTTTCTCTTGCTTATCTGTGGCTGCGGAGAAGCAATAAGAGGGCAAAGAAATTACCACCAGGTCCAACAGGGTTGCCAATTTTGGGAAGCCTTCACAAGTTGGGAGCAAATCCTCATCGTGATTTGCACCAACTAGCCAAAAAGTATGGATCTATCATGTACTTGCGCTTAGGTTTTGTGCCCACCATTGTCGTTTCTTCACCCCAAGCTGCTGAACTCTTCCTCAAGACCCATGACATTGTATTTGCTAGCAGACCACCTCATGAAGCTGCAAAATACATCTCTTGGGAGCAGAGAAACTTAAGCTTTGCTGATTATGGTTCTTACTGGCGCAACATGCGTAAGATGTGCACGTTAGAATTGCTAAGCCAAACCAAAATTAACTCCTTCAGAAGCATGAGGGAAGAGGAGCTCGACCTATTGATCAAGCTCCTAAGAGAGGCAGCCAATGATGGAGCTGCTGTTGATCTCAGTGCCAAAGTTTCAACACTCAGCGCAGACATGTCTTGCAGAATGGTTCTAGGGAAGAAGTACATGGACCGGGACTTAAATGAGAAAGGGTTCAAGGCTGTGATGCAAGAGGGAATGCATTTAGCAGCAACTCCTAACATGGGAGATTACATTCCTTACATCGGTGCACTTGACCTACAAGGCTTAACTAAGCGCATGAAAGCTGTTGCCAAAATCTTCGATGACTTTTTTGAGAAAATTATTGATGAGCACATACAATCAGAAAAGGGAGAAGACAAGACAAAGGATTTTGTGGATGTCATGTTGGGCTTTGTGGGTACTGAAGAATCTGAATACCGCATCGAGAGGCCCAATATCAAAGCCATTATGTTGGATATGTTGGCTGGCTCCATGGATACTTCTGCTACAGCAATCGAGTGGACACTTTCAGAGCTCTTAAAGAATCCAAGGGTGATGAAGAAACTCCAAAGGGAATTGGAAAGCGTGGTGGGTATGAAGAGGAAGGTGGAAGAATCAGACTTAGAAAAGTTAGAGTATTTGGAGATGGTTATAAAGGAAAGCATGAGGCTGCATCCAGTGGCACCGTTGCTAATACCACACCAGTCCACAAAAGATTGCATGGTTGGAGAGTTTTTGATTCCTGAAAAGTCAAGGGTGATAGTGAATGCATGGGCAATTATGAGAGATACAAGTGCCTGGGAAGAAGCAGAGAAGTTCTGGCCAGAGAGATTTGAGGGAAGGAGCATAGATGTGAGAGGGCGTGATCAGTTTGAGCTGATACCATTTGGGTCAGGCAGAAGGGGATGTCCAGGGATACAACTGGGTCTAACTGTGGTTCGTCACACAGTGGCTCAACTTGTGCATTGTTTTGATTGGAAACTACCAAATGAAATGACGCCAGGTGAGTTGGACATGACAGATGAGTTCGGCCTCACAATGCCTAGAGCTAATCCTCTCTATGCCATTCCTTCCTATCGGCTTTCCAATGAAAGGGATTCCATGAAATCAATTCCATAG 1512 0.4458 MIWIAILLVSLAYLWLRRSNKRAKKLPPGPTGLPILGSLHKLGANPHRDLHQLAKKYGSIMYLRLGFVPTIVVSSPQAAELFLKTHDIVFASRPPHEAAKYISWEQRNLSFADYGSYWRNMRKMCTLELLSQTKINSFRSMREEELDLLIKLLREAANDGAAVDLSAKVSTLSADMSCRMVLGKKYMDRDLNEKGFKAVMQEGMHLAATPNMGDYIPYIGALDLQGLTKRMKAVAKIFDDFFEKIIDEHIQSEKGEDKTKDFVDVMLGFVGTEESEYRIERPNIKAIMLDMLAGSMDTSATAIEWTLSELLKNPRVMKKLQRELESVVGMKRKVEESDLEKLEYLEMVIKESMRLHPVAPLLIPHQSTKDCMVGEFLIPEKSRVIVNAWAIMRDTSAWEEAEKFWPERFEGRSIDVRGRDQFELIPFGSGRRGCPGIQLGLTVVRHTVAQLVHCFDWKLPNEMTPGELDMTDEFGLTMPRANPLYAIPSYRLSNERDSMKSIP* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03356 503 SUPERFAMILY Cytochrome P450 27 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 Gene3D Cytochrome P450 12 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 PANTHER CYTOCHROME P450 93A3-LIKE 3 493 - -
Lapu3g03356 503 Pfam Cytochrome P450 27 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03356 503 FunFam Cytochrome P450 83B1 14 487 - -
Lapu3g03356 503 Coils Coil 317 337 - -
Lapu3g03356 503 CDD CYP71-like 56 484 - -
Lapu3g03356 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03356 Lapu-Chr3 56836060 56837903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03356 20 489 Cytochrome P450 AT3G48310 40.506 1.08e-128 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03356 K20562 - gmx:100809526 875.544