Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03342 ATGGCACTCTCACTGTGTTCCAGTGTCCGCGTTCCTTATTGCTCTCCTTCGTGTTTTTGGAAACCAAATAGTAAGAATTGCGAAGCGCCTACTAAGGTGTCATGTGCAGTGCACAGTGATAATAAGAATCCTTTGGTTGGAATGGGTATTGGGTTGGTAACGGCTTGGGTGATGGGTTCAACGGCGTTGGACGCGGACGCCACAAGAATCGAATACTACGCTACCGTTGGGGAGCCTTTGTGTGAGTACAAGTATGTGAAGTCTGGCCTCGGTTACTGTGATATTGTTGAGGGCTTCGGTGTGGAAGCTCCACTCGGTGAGCTTATCAATGTTCACTATACTGCGAGATTCGCTGATGGGATAGTGTTTGATAGCAGCTATAAACGTGGTAGATCTCTCACCATGCGCATTGGTGTTGGCAAGGTAATCAAGGGACTGGATCAGGGAATTTTAGGGGGTGAAGGAGTACCTCCGATGCGGATTGGTGGGAAACGCAAACTGCACATTCCTCCGCAATTAGCATATGGCCCTGAACCTGCCGGGTGCTTTTCAGGTGACTGCAACATACCCGCCAATGCCACTCTTCTGTATGATATTAAATTTGTTGAGCTCTATTCGGGGAACAGATCAAAGTGA 636 0.4827 MALSLCSSVRVPYCSPSCFWKPNSKNCEAPTKVSCAVHSDNKNPLVGMGIGLVTAWVMGSTALDADATRIEYYATVGEPLCEYKYVKSGLGYCDIVEGFGVEAPLGELINVHYTARFADGIVFDSSYKRGRSLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRKLHIPPQLAYGPEPAGCFSGDCNIPANATLLYDIKFVELYSGNRSK* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03342 211 SUPERFAMILY FKBP-like 82 203 - -
Lapu3g03342 211 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 103 201 IPR001179 GO:0003755
Lapu3g03342 211 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 106 205 IPR001179 GO:0003755
Lapu3g03342 211 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 21 209 IPR044183 GO:0009507
Lapu3g03342 211 Gene3D - 79 203 IPR046357 GO:0003755
Lapu3g03342 211 FunFam Peptidylprolyl isomerase 78 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03342 Lapu-Chr3 56712338 56714838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03342 82 206 Calmodulin-binding Proteins AT3G25230 38.583 6.78e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03342 K01802 - gmx:100500547 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03342 3 56712338 56714838 Lapu3g03342 3 56712338 56714838 ECH