Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03336 ATGCAGAGAACAGAGTTCTCCCAAACACTTCAATCAAACATGGCCTTGTCAGCCGCTGAAACGCCAAAGGTAGAAGAGAAGGCAACTTCAGAACATTATGAAAGGTCTCAGTGGGTGCTCAACGCTCCTGATCCCCCAACTACGTGGCAAAAGCTCAGGGGTTTTCTGAGCAACACAATCTCACAGTACCAAGAAATGTGTTTTGCTCTAAGAAGCCACCATGGACCTAAAGTTCTACTTTCTTTCTTGCGAAGCATTTTTCCTATTCTTCTTTGGGCTCCAAATTATTCACCAACAAACTTCAAAAACGACTTACTTGCTGGTCTAACCATCGCAAGTCTCTGCATACCTCAGAGCATTGGGTATGCCACCTTAGCAAAGCTTGATCCTGAATATGGACTCTATACTAGTGTGGTGCCACCTCTTATATATGCTTTGATGGGAACGTCAAGAGAAATAGCAATTGGACCTGTGGCGGTGGTATCACTTCTTTTGTCATCAATGATTGAGAAATTAGTAGATCCTGCCATTGATCCAAATGGGTACAGAAAGCTTGTTTTCACTGCCACTTTCTTTGCTGGTATATTTCAAGCTGCTTTTGGACTATTCAGGTTGGGGTTTCTTGTGGATTTTGTGTCTCATGCAGCTATTGTTGGATTCATGGGGGGAGCAGCAACAATAATTGGTCTTCAACAGCTGAAGGGACTATTTGGGATTAACCATTTTACGACCAAAACAGACATAATCTCTGTCATGAAATCCATTTGGGAATCAGTTCATCATCCATGGAATCCGCACAACTTTATGCTAGGATGTTCATTCTTTATTTTCATCCTGTTTACCAGATTTCTGGGTAAAAGGAATGCGAAACTGTTCTGGCTGCCAGCGATATCTCCTCTTTTATCAGTTATGTTATCAACTCTTATTGTTTTTCTGACACGAGCTGACAAAAGTGGAGTTAACATAGTGAAACATATAAAAGGAGGATTGAATCCACCCTCTATCGATCAAATAGAGTTGAACACCCCACATATTGGAGCATTGGCTAAAATTGGACTATTTGTTGCTGCTGTTGCACTCACTGAATCTGTTGCTGTTGGGCGATCTTTTGCATCCATAAAAGGATACCACCTTGATGGAAACAAGGAAATGGTATCATTAGGCTTCATGAACATCATAGGATGCATCTCCTCTTGCTATGTTGCAACTGGTTCTTTCTCCCGCACAGTGGTTAATTTCACTGCGGGTTGTGAAACATTAGCCTCAAACATTGTGATGGCCATTGTCGTGATCATATCACTAAATTGTTTGACGAAGCTATTGTACTTTACACCAACTGCTATTCTGGCTTCAATAATCCTTTCAGCTCTGCCGGGGCTCATAGACATCAATGAAGCTTACAAAATATGGAAAGTTGATAAGCTTGATTTTCTTGCTTGTGTTGGAGCCTTCTTTGGGGTGATCTTTGCGTCTGTGGAACTTGGTCTGCTAGTTGCCGTGGCAATATCTTTCACAAAGATAATTTGGATCTCGATTGGAGCAGGCACAGAAACGCTGGGAAGACTTCCGGGTACAGATGTGTTCTGCAATGTACAACAGTATCCTATGGCTGTTAAGACTCCTGGGGTTGCAATAATACGTGTAAAGTCTGCATTGCTTTGCTTTTCTAATGCTAATTCAGTCAGAGAGAGGATCCTGAAATGGATCACTCGGGAAGATGCAAAGGGGAAAACAGATGGCAACACTGGAAACATAATTCAGCTCGTAATCCTTGATACCTCTAATTTGGTGAGCATTGACACCTCAGGAATTGCTTCTCTAGAGGAACTGCATAAGAGTTTGGTCTCAAGTGGGAAGCAGCTAGCAATTGTCAACCCTAGGTGGCAAGTGATTTACAAGCTAAAGGCAACCAACTTTGTCACAAGAATTGGAGGAAGGGTCTTCTTGACTATTGGAGAAGCTATTGACTGCAATCTGGATTTTTAA 1986 0.4199 MQRTEFSQTLQSNMALSAAETPKVEEKATSEHYERSQWVLNAPDPPTTWQKLRGFLSNTISQYQEMCFALRSHHGPKVLLSFLRSIFPILLWAPNYSPTNFKNDLLAGLTIASLCIPQSIGYATLAKLDPEYGLYTSVVPPLIYALMGTSREIAIGPVAVVSLLLSSMIEKLVDPAIDPNGYRKLVFTATFFAGIFQAAFGLFRLGFLVDFVSHAAIVGFMGGAATIIGLQQLKGLFGINHFTTKTDIISVMKSIWESVHHPWNPHNFMLGCSFFIFILFTRFLGKRNAKLFWLPAISPLLSVMLSTLIVFLTRADKSGVNIVKHIKGGLNPPSIDQIELNTPHIGALAKIGLFVAAVALTESVAVGRSFASIKGYHLDGNKEMVSLGFMNIIGCISSCYVATGSFSRTVVNFTAGCETLASNIVMAIVVIISLNCLTKLLYFTPTAILASIILSALPGLIDINEAYKIWKVDKLDFLACVGAFFGVIFASVELGLLVAVAISFTKIIWISIGAGTETLGRLPGTDVFCNVQQYPMAVKTPGVAIIRVKSALLCFSNANSVRERILKWITREDAKGKTDGNTGNIIQLVILDTSNLVSIDTSGIASLEELHKSLVSSGKQLAIVNPRWQVIYKLKATNFVTRIGGRVFLTIGEAIDCNLDF* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03336 661 MobiDBLite consensus disorder prediction 1 27 - -
Lapu3g03336 661 NCBIfam sulfate permease 88 647 IPR001902 GO:0016020|GO:0055085
Lapu3g03336 661 Pfam STAS domain 534 654 IPR002645 -
Lapu3g03336 661 ProSitePatterns SLC26A transporters signature. 130 151 IPR018045 GO:0008271|GO:0008272
Lapu3g03336 661 PANTHER SULFATE TRANSPORTER 62 656 IPR001902 GO:0016020|GO:0055085
Lapu3g03336 661 MobiDBLite consensus disorder prediction 1 18 - -
Lapu3g03336 661 FunFam Sulfate transporter 31 514 660 - -
Lapu3g03336 661 Gene3D STAS domain 515 658 IPR036513 -
Lapu3g03336 661 SUPERFAMILY SpoIIaa-like 538 656 IPR036513 -
Lapu3g03336 661 ProSiteProfiles STAS domain profile. 553 658 IPR002645 -
Lapu3g03336 661 CDD STAS_SulP_like_sulfate_transporter 534 649 - -
Lapu3g03336 661 Pfam Sulfate permease family 101 481 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03336 Lapu-Chr3 56668368 56675463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03336 4 656 Inorganic Solute Cotransporters AT5G10180 64.931 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03336 K17469 - gmx:100775538 1148.27