Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03309 ATGGCTGAGGCCAGACACTACGTTCTCCCCTCTCAATTGGGTCAGCTTTTCTTCACTTTAATTCCCCTTTTATTGCTTGACATTCGCAAAATTCAAACTCTGAAGAAAGAAACCCTTTTTAAAAATATTAAGCAAATTATTGTAGAAGCACAGAATCGATGGCTGCGTCCGGCTGAAATTTGTGCAATTCTCAACAATTATACAAAGTTTCGAATTGCTCCAGAACCTGCTCATATGCCACCAAGTGGTTCACTTTTCTTATTTGATCGGAAGGTGCTGAGATACTTCAGGAAGGATGGCCACAACTGGAGGAAGAAAAAAGATGGTAAAACAGTGAGAGAAGCACATGAGAGATTAAAGGCTGGAAGTGTGGATGTGTTGCATTGCTACTATGCTCATGGAGAAGAAGATGAGAATTTTCAAAGACGAACATATTGGCTGCTTGAAGAGGAACTCTCTAACATTGTTCTAGTTCATTATCGACAAGTGAAGGGAACCAAGGCAAATTATACATGTGCTAAGGAAAATGAAGAATCTCTTCCTTATGCTCAACAAACTGACAAAATTGTGCTCAAAGCAGAGATGGACAATTCTTTTTCGTCCACTCTTCATTCAAACAGCTACCAATTTCCTTCACAGACTATGGATACAAGCATGAACAGTGCCCAAGTATCAGAATACGAAGAAGCTGAATCTGCATTCAGTAGCCATGCAAGTTCTGACTTTTATTCTTTCCTTGAGTTACAAAGCCCTGTCAAGAAGATTATAGATCAACCTGCTGATTCTTATTCTCCTCGGCCACTCATAAATGAGCAAAAGAAGTTACCTATCTTTGCTGAGGTGAATTATATCTCACTCACTCAAGACAAAAAAATTATAGACATTCATAATGTTGGATTGACATATGAATCCCCAAAACCCCTTGGCTTTTCCTCATGGGAAGATATCTTAGAAAATAATGGTGAAAGTCAACACGTGCCTTTTCAGCCTTTATTTTCTGAAACGCAACCTGATAACATGGGAGTTGATAGCAATTTTTATCAAGGAGATGACATAATGGTGCCACATTTGACCACCAGCATTGCTAAGCTGCATGACAATGGAAGTCTCATCCAAGCTGATGGAAGTTGGCAGGCTTATAGTGTTGATTCTTTACGCATGTCCAGTTGGCCTATAGATAGTGTCCATTCAAGCTCAACATGTGAGGTTAGTTGTAGCAACTGTGAGCACGAAGTCTATGAAGTTGATTTTCAGAAATCCTTGGAACAGTCTCTTCTCCATCCACACAAACAAAACAAGGTTCTCATGCTAAATGATCCTCAAGAGATACTTCTGAATACAAAAGAAAAGCTAAAATCAGATTTTGAGGTCAATAGAACCGTGGATGGAATAGAAGACACGCGTTTCACTTTTAAAAGGACTCTGTTAGATGGATCCCCAGCAGAAGAGGGTCTGAAGAAGCTTGACAGTTTCAACCAATGGATGAGTAAAGAACTTGGAGATGTGGAAGAATCAAATAAACCATCTACTTCTGGTGCTTATTGGGATACAGTTGAACGTGAAAGTGAGGTTTGCAGCACAACTATTCCTTCCCAAGGACACCTGGACACCTATGTATTGGATCCATCTGTTTCCAATGATCAGCTTTTTAGCATTATTGACTATTCCCCAAGCTGGGCATTTGAAGGGTCAGAAATTAAGATTATCATTTCTGGACGATTCTTAAGAAGTCAGCAAGAAGCAGAACAATGTAAATGGTCATGCATGTTTGGCGAGGTAGAAGTACCTGCAGTGATACTCACAAAAGGTGTTCTTTGTTGTCATACTCCTCCACACAAGGCTGGGAGGGTACCTTTCTATGTAACTTGTTCCAACAGGTTAGCATGTAGTGAAGTGCGAGAATTTGATTTCCAGGTCAACTATACTCGTGAAGTCAACATTGCAGGTGAGGATAGAGCCACCACTTCTGATACTTTTAGTAGACGATTTGGAGAACTGTTGTCCCTGGGACATGCCTTTCCTCAGAATTCAGATTCAATCAGTGGAAATGAGAAATCTCAACTGAGAAGTAAAATCAGTTCTTTGCTAAAGGGGGAGGATGATGTTTGGGACAAGCTACTGGAACTTACTCTAGAGAAAGATTTTTCTCCGGAAGATTTACAGGAGCAGCTGCTTCAAAATCTTCTGAAAGATAAGTTGCACGCATGGCTCCTTCAGAAAATTACAGACGATGGGAAAGGCCCCAATGTATTGGATGAGGGTGGCCAAGGTGTGCTTCATTTTGCTGCTGCTCTTGGCTACCATTGGGCCCTAGAACCCACAATAGTTGCTGGTGTGAATGTGAACTTTCGTGACATAAATGGATGGACTGCTCTTCATTGGGCAGCATTTTGTGGATGGGAGCGCACAGTTGCTTTCCTCATATCTCTTGGCGCAGCACCTGGATTACTGACTGATCCAAGTCCAGAACATCCTTCTGGTAGAACACCAGCTGATCTAGCTTCTGCAAATGGACATAAAGGAATTTCAGGGTATCTTGCAGAATCTGCACTAAGTGCACAGCTCACAACTCTTGATTTGAACAAGGATGTGGGAGAAAATTCTGGAACCAAAGTAGTCCAAAGAATCCAAAACATTGCCCCAGTTAATGATCTTGATGGTCTATCATATGAACAGTCGCTGAAAGATTCATTGGCTGCAGTGTGCAATGCCACCCAAGCTGCGGATCGTATTCGTCAAGTTTTCAGAATGCAATCATTCCAGAGAAAGCAACTGAAGGAATTTGGTGATGACAAATTTGGAATATCAGATGAACGTGCTCTTTCACTTGTAAAAATGAATGGGAAATCACACAAGTCTGGATCGCGCGATGAGCCTGTCCATGCTGCTGCCATACGTATCCAGAACAAATTCCGCGGTTGGAAGGGCAGAAAAGAATTTTTGATGATTCGACAGCGTATAGTAAAAATTCAGGCTCACGTAAGAGGACACCAGGTTAGGAAAAATTGTGGGAAGATAATCTGGTCTGTCGGAATATTAGAGAAGGTTATTTTGCGTTGGCGTCGAAAAGGTAGTGGTTTGCGAGGATTTAAATCAGAGGCCAATTCTGAAGTAACTATGATACAAGATGAATCTCCCACTGAGGATGACTACGATTTCTTAAAAGAAGGCAGGAAGCAAACAGAGCAAAGATTGCAGAAAGCCCTAGCCAGGGTGAAGTCAATGGTTCAGTATCCAGAGGCAAGGGACCAATACCATAGGGTGTTGAATGTAGTAACTGAGATCCAAGAAAATCAGGTAAAGCATGATAGCAGTTGTAACAATTCAGAAGAAACAAGAGACTTCAATGACCTCACTGATCTTGAAGCACTGTTGGACGAAGATATTTTCATGCCTACAGCAACTTAG 3408 0.4137 MAEARHYVLPSQLGQLFFTLIPLLLLDIRKIQTLKKETLFKNIKQIIVEAQNRWLRPAEICAILNNYTKFRIAPEPAHMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHERLKAGSVDVLHCYYAHGEEDENFQRRTYWLLEEELSNIVLVHYRQVKGTKANYTCAKENEESLPYAQQTDKIVLKAEMDNSFSSTLHSNSYQFPSQTMDTSMNSAQVSEYEEAESAFSSHASSDFYSFLELQSPVKKIIDQPADSYSPRPLINEQKKLPIFAEVNYISLTQDKKIIDIHNVGLTYESPKPLGFSSWEDILENNGESQHVPFQPLFSETQPDNMGVDSNFYQGDDIMVPHLTTSIAKLHDNGSLIQADGSWQAYSVDSLRMSSWPIDSVHSSSTCEVSCSNCEHEVYEVDFQKSLEQSLLHPHKQNKVLMLNDPQEILLNTKEKLKSDFEVNRTVDGIEDTRFTFKRTLLDGSPAEEGLKKLDSFNQWMSKELGDVEESNKPSTSGAYWDTVERESEVCSTTIPSQGHLDTYVLDPSVSNDQLFSIIDYSPSWAFEGSEIKIIISGRFLRSQQEAEQCKWSCMFGEVEVPAVILTKGVLCCHTPPHKAGRVPFYVTCSNRLACSEVREFDFQVNYTREVNIAGEDRATTSDTFSRRFGELLSLGHAFPQNSDSISGNEKSQLRSKISSLLKGEDDVWDKLLELTLEKDFSPEDLQEQLLQNLLKDKLHAWLLQKITDDGKGPNVLDEGGQGVLHFAAALGYHWALEPTIVAGVNVNFRDINGWTALHWAAFCGWERTVAFLISLGAAPGLLTDPSPEHPSGRTPADLASANGHKGISGYLAESALSAQLTTLDLNKDVGENSGTKVVQRIQNIAPVNDLDGLSYEQSLKDSLAAVCNATQAADRIRQVFRMQSFQRKQLKEFGDDKFGISDERALSLVKMNGKSHKSGSRDEPVHAAAIRIQNKFRGWKGRKEFLMIRQRIVKIQAHVRGHQVRKNCGKIIWSVGILEKVILRWRRKGSGLRGFKSEANSEVTMIQDESPTEDDYDFLKEGRKQTEQRLQKALARVKSMVQYPEARDQYHRVLNVVTEIQENQVKHDSSCNNSEETRDFNDLTDLEALLDEDIFMPTAT* 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03309 1135 ProSiteProfiles Ankyrin repeat profile. 787 819 IPR002110 GO:0005515
Lapu3g03309 1135 FunFam Calmodulin-binding transcription activator 2 545 641 - -
Lapu3g03309 1135 Pfam Ankyrin repeats (3 copies) 759 852 IPR002110 GO:0005515
Lapu3g03309 1135 SUPERFAMILY E set domains 552 637 IPR014756 -
Lapu3g03309 1135 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 42 1098 - -
Lapu3g03309 1135 ProSiteProfiles IQ motif profile. 983 1007 IPR000048 GO:0005515
Lapu3g03309 1135 FunFam Calmodulin-binding transcription activator 2 959 1007 - -
Lapu3g03309 1135 Coils Coil 1051 1071 - -
Lapu3g03309 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 956 1009 IPR027417 -
Lapu3g03309 1135 ProSiteProfiles IQ motif profile. 961 989 IPR000048 GO:0005515
Lapu3g03309 1135 FunFam Calmodulin-binding transcription activator 2 716 863 - -
Lapu3g03309 1135 SUPERFAMILY Ankyrin repeat 732 848 IPR036770 -
Lapu3g03309 1135 SMART CG_1_2 46 164 IPR005559 GO:0003677
Lapu3g03309 1135 Pfam IQ calmodulin-binding motif 961 980 IPR000048 GO:0005515
Lapu3g03309 1135 Pfam IQ calmodulin-binding motif 985 1002 IPR000048 GO:0005515
Lapu3g03309 1135 Pfam IPT/TIG domain 552 627 IPR002909 -
Lapu3g03309 1135 Gene3D - 712 875 IPR036770 -
Lapu3g03309 1135 ProSiteProfiles CG-1 DNA-binding domain profile. 43 169 IPR005559 GO:0003677
Lapu3g03309 1135 Gene3D - 958 1006 - -
Lapu3g03309 1135 SMART iq_5 982 1004 IPR000048 GO:0005515
Lapu3g03309 1135 SMART iq_5 959 981 IPR000048 GO:0005515
Lapu3g03309 1135 Pfam CG-1 domain 49 162 IPR005559 GO:0003677
Lapu3g03309 1135 Gene3D Immunoglobulins 544 641 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03309 Lapu-Chr3 56379826 56387935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03309 42 1117 CAMTA Transcription Factor Family AT5G64220 46.533 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lapu3g03309 CG-1 9.6e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03309 K21596 - gmx:100798875 1857.42