Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03275 ATGTCCAAACCCTGGGGCAACATCGGAGCCTGGGCCGCCGATTCCGAGCGAGCCGAGGCCGAGGAGCGCGAGGCCCAGGCTGCAGCCGCGGCAGCCGAGACCCAAAACTTCCCCAGCCTCAAGGAGGCCGTCAACTCCAAGCCCAAGAAGAAGAAGGGCACCACCATCACGCTTTCTGAGTTCAACCGAGGTGGTTTCGCCTCCGCCGGCGAACACCAGGGCCTCACGCGCGACGAGATGATGGCGCTCCCGACCGGCCCCAAGGAACGCTCCGCTGAGGAAATGCAGTTCAACCGCCTCGGCGGCGGTTTCTCTTCCTACGACCGCTCCGGTGGTCGCTCGCGCGACCGCGATGGCGGAAACAGCGATGGCTCCTGGGGCGGAGGCGGGAGAAGATCCTACGGCGGATTCGACGAGGAACGCAGGGGTCCGAATCCTAGGGTTTCGGAACTCGATCAGCCTTCCAGGGCTGATGAGGTCGACAATTGGGCGTCCGTGAAGAAATCTGTCCCCGCGTTTGATTCTGGCCGGCAGAATCGCTACGGAGGAGGAGGGGGCGGTGGAGGCGGTTTTGGCTCCGGCGGTGGTGGTTTTGGTGCAGGCGGTGGCGGTGGCGGTGGTTTTGGTGGTGCGTCTAGGGCTGATGGTGTGGATAATTGGGCGGTTGGTAAGAAGCCTGTTCCTGTTAGATCTTCCAATTTCGGTTCTGGTTTTCGTGATTCCGGCGTGGAGCCTGATCGTTGGTCGAGAAGTGGTCCTCCGCGGGAGACGGAGCGGATGGAGCGGCCGAGGCTGGTTTTGGATCCGCCAAGGGGCGATGGTTCGGTGAATGAGGCTCCTGTGAAGGCCACTAACAAGGGCAATCCGTTCGGTGCGGCGAGGCCCAGGGAGGAGGTGTTGGCTGAGAAGGGATTGGATTGGAAGAAGATGGATTCAGAGATTGAGGCGAAGAAGACGAGCCGGCCCACGAGTTCTCAGTCTAGCCGGCCCTCCAGTGCTCAGTCGAATCGCTCTGAGGGTCCCGGGTTGCAAGGGGCCGATGCTGTGCCGAAATCGAGGCCCAAGTTGAATCCATTTGGGGATGCCAAGCCTAGGGAGGTTCTGCTGGGCGAGCGAGGCATGGATTGGAGGAAGATTGATCTTGATTTGGAGCATCGCTCTGTTGACAGGCCTGAGACAGTGGAGGAAAAGTTATTAAAAGAAGAAATTGATAATTTGAAGAAAGAACTTGAGAAGGAGTCTCCAATAAATTCAAACAAGGAATCTGAGGATGAGGCTGGTGGAGATCAAACCAGTACATATGCCATATTACGACAGAAAGAAAAGGAGCTGGAACTTCTTGCCCGTGATTTGGATGACAAAGTCCGATTTGGACAGAAAGCCGTTGAAAGGCCAGGTTCATCAGCAGGAAGGTCTTCTGGTTTTTCTGATAGGCCACCTTCTAGATCTGGCTCATTTGAGGATTCTAGAAGTGTAGATTATACAGACAGACCACGATCTCGTGGTACAGGAGATGTGTGGGCCCGTCCTAGTGAGGACAGAAGACAGTTCCAAGGTAGCAGCAGGGAAAGAGGGTGGTTTTCTGGCAGCAGAGATTTAAATAGGACAAATTCAAGAGAGAGATGGTGA 1629 0.5648 MSKPWGNIGAWAADSERAEAEEREAQAAAAAAETQNFPSLKEAVNSKPKKKKGTTITLSEFNRGGFASAGEHQGLTRDEMMALPTGPKERSAEEMQFNRLGGGFSSYDRSGGRSRDRDGGNSDGSWGGGGRRSYGGFDEERRGPNPRVSELDQPSRADEVDNWASVKKSVPAFDSGRQNRYGGGGGGGGGFGSGGGGFGAGGGGGGGFGGASRADGVDNWAVGKKPVPVRSSNFGSGFRDSGVEPDRWSRSGPPRETERMERPRLVLDPPRGDGSVNEAPVKATNKGNPFGAARPREEVLAEKGLDWKKMDSEIEAKKTSRPTSSQSSRPSSAQSNRSEGPGLQGADAVPKSRPKLNPFGDAKPREVLLGERGMDWRKIDLDLEHRSVDRPETVEEKLLKEEIDNLKKELEKESPINSNKESEDEAGGDQTSTYAILRQKEKELELLARDLDDKVRFGQKAVERPGSSAGRSSGFSDRPPSRSGSFEDSRSVDYTDRPRSRGTGDVWARPSEDRRQFQGSSRERGWFSGSRDLNRTNSRERW* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03275 542 MobiDBLite consensus disorder prediction 379 398 - -
Lapu3g03275 542 MobiDBLite consensus disorder prediction 1 374 - -
Lapu3g03275 542 Coils Coil 434 454 - -
Lapu3g03275 542 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 541 IPR010433 GO:0003743
Lapu3g03275 542 MobiDBLite consensus disorder prediction 455 542 - -
Lapu3g03275 542 MobiDBLite consensus disorder prediction 406 436 - -
Lapu3g03275 542 MobiDBLite consensus disorder prediction 134 163 - -
Lapu3g03275 542 MobiDBLite consensus disorder prediction 243 268 - -
Lapu3g03275 542 MobiDBLite consensus disorder prediction 469 488 - -
Lapu3g03275 542 MobiDBLite consensus disorder prediction 319 341 - -
Lapu3g03275 542 MobiDBLite consensus disorder prediction 406 427 - -
Lapu3g03275 542 Coils Coil 13 35 - -
Lapu3g03275 542 Pfam Plant specific eukaryotic initiation factor 4B 1 525 IPR010433 GO:0003743
Lapu3g03275 542 MobiDBLite consensus disorder prediction 489 520 - -
Lapu3g03275 542 MobiDBLite consensus disorder prediction 296 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03275 Lapu-Chr3 55997752 56005898 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03275 1 542 Eukaryotic Initiation Factors Gene Family AT3G26400 56.483 1.49e-151 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03275 - - gmx:100784238 798.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03275 3 55997752 56005898 Lapu3g03275 3 55997752 56005898 ECH