Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03241 ATGCTTGGTTGGGCTTTGCATTCTAAAACTCAAATGGAAAACATCCATTGGTCTCATAAACATTTAGTGGTGCTGTGTTTCTTGGCAATGATTGTAATACCTTCCTTGTGTCAAAGTGAAGTAACTACAGCTGTGTACATTGTTACTCTGAGACAAGCTCCAGCTTCTCACTACCATCATGAGTTGATCACAGTGGGTAACAAGTCTAGACACGGTGCATCTGGGAGAAGAAGAACTAGAGTCCATAAACCAAGACATCAGAATGTTACAAAGGAAGACAAGGGACATATTTCATACTTTGCCCGAGTTCATGACTCGTTGTTGAATAAGGTGTTTAAGGGAGAGAAATATCTGAAGCTCTATAGCTATCATTACTTGATTAATGGATTTGCTGTGCTGGTTACTCAACAGCAGGCAGAGAAACTGTCAAGGAGAAGAGAAGTGTCCAATGTGGTTTTGGATTTTTCTGTGAGAACTGCAACCACCCACACTCCACAATTTTTGGGGCTGCCACAGGGAGCTTGGTTGCAAGCAGGTGGGTTTGAAACTGCTGGAGAAGGAATTACTATTGGGTTTGTTGACACTGGCATTGATCCTACACACCCCAGTTTTGCTGATGATAAATCTCAACATCCTTTCCCTATTCCTGCTAATTTCTCTGGCGTCTGTGAGGTTACTCCAGATTTTCCATCCGGTTCTTGCAATAGGAAGCTTGTTGGGGCCAGACATTTTGCAGCTTCTGCTATAACCAGAGGAATATTCAACTCATCTCAAGACTATGCTTCTCCCTTTGATGGAGATGGCCATGGCACGCACACAGCTTCTGTTGCAGCTGGAAACCATGGAATTCCAGTGGTCGTTGCTGGACAATTTTTTGGAAATGCTAGTGGGATGGCTCCTCGTTCGCACATTTCCATTTACAAGGCACTATACAAGAGATTTGGAGGATTTGCAGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATGGGGTTGACATAATATGCTTGTCAATCACTCCTAATAGGCGTCCTTCTGGTATTGCAACTTTCTTCAACCCAATTGATATGGCATTGCTGTCAGCTGTAAAAGCTGGTATTTTTGTAGTGCAAGCTGCTGGCAACACTGGACCATCACCTATGAGCATGTCCTCCTTCAGTCCTTGGATCTTTACAGTTGGTGCCACCTCTCATGATCGAGTTTATAGCAACTCCCTATGTCTTGGAAATAATGTGACCATACCAGGAGTTGGACTTGCACCCGGCACACATGAGAACACAATGTTCAAACTGATTCATGCACGACATGCTTTGAACAAAACCACAACAGTTGCTGATGATATGTATATTGGTGAGTGTCAAGATGCAAGTATATTCAATCAGGATTTGGTCCAGGGCAACCTTTTGATCTGTAGCTATTCAGTCCGATTTGTGCTTGGGCTCTCCACTATCAAACAGGCCTTAGAAACAGCCATGAACCTTAGTGCGGTTGGTGTTGTTTTCTCCATGGATCCTTTTGTGACTGCTTTTCAGCTTAACCCAGTTCCAATGAAAATTCCTGGCATAATAATTCCATCTGCAAATGATTCCAAGATATTACTGCAGTACTACAATTCTTCACTGGAAATAAACGGGGATTCAAAAAAAATTGTTAAATTTGGGGCTGTTGCTAGTATTGGTGGTGGATTAGAAGCTAACTACAATAATGAGGCCCCAAAAGTTGTTTATTACTCTGCCAGAGGACCCGATCCAGAGGACAGTCTTCCTCGTGAAGCTGACATTATGAAACCCAATTTGGTAGCACCTGGAAATTTTATATGGGCTGCTTGGAGTTCTGTTGCCTCTGATTCTGTTGAATTTCTAGGTGAGAATTTTGCATTGATGTCTGGCACAAGCATGGCTGCTCCTCATGTTGCTGGTCTTGCTGCGTTAGTTAAGCAAAAGTTTCCCAATTTCGGTCCTGCAGCCATTGGATCTGCGCTTTCCACCTCAGCTTCTCTGTATGACAACAATGGGAGGTCAATAATGGCTCAGAGATCATATCCTACCATAGACCTTAACCTATCTCCAGCAACTCCCTTTGACATGGGAAGTGGTTTTGTGAATGCTACTGCCGCATTAAATCCGGGATTGCTTTTTGATTCTAGTTATGATGATTATATGTCATTCCTATGTGGTATCAATGGTTCAACTCCTACAGTGCTAAACTACACCGGTCAAAATTGCTGGACTTATAACTCTACAGTATATGGCCCTGATCTGAACTTGCCCTCAATCACAATAGCAAGGTTGAACCAATCTAGAGTAGTGCAAAGAACAATCCAAAACATTGCTGGAAATGAAACATACAATGTTGGTTGGAGTGCTCCATATGGCACTTCAATGAAAGTGTCTCCGAATCACTTCTCTCTTGGCAGTGGGGAGAGACAAGTCTTGTCTGTGATCTTCAATGCAACCAGTAACAGCTCTGCTGCCAGCTATGGGAGAATTGGGCTGTATGGTAACCAAGGACATGTTGTCAACATTCCTGTGTCAGTCATTTTCAAAATCTTATAA 2559 0.4299 MLGWALHSKTQMENIHWSHKHLVVLCFLAMIVIPSLCQSEVTTAVYIVTLRQAPASHYHHELITVGNKSRHGASGRRRTRVHKPRHQNVTKEDKGHISYFARVHDSLLNKVFKGEKYLKLYSYHYLINGFAVLVTQQQAEKLSRRREVSNVVLDFSVRTATTHTPQFLGLPQGAWLQAGGFETAGEGITIGFVDTGIDPTHPSFADDKSQHPFPIPANFSGVCEVTPDFPSGSCNRKLVGARHFAASAITRGIFNSSQDYASPFDGDGHGTHTASVAAGNHGIPVVVAGQFFGNASGMAPRSHISIYKALYKRFGGFAADVVAAIDQAAQDGVDIICLSITPNRRPSGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGATSHDRVYSNSLCLGNNVTIPGVGLAPGTHENTMFKLIHARHALNKTTTVADDMYIGECQDASIFNQDLVQGNLLICSYSVRFVLGLSTIKQALETAMNLSAVGVVFSMDPFVTAFQLNPVPMKIPGIIIPSANDSKILLQYYNSSLEINGDSKKIVKFGAVASIGGGLEANYNNEAPKVVYYSARGPDPEDSLPREADIMKPNLVAPGNFIWAAWSSVASDSVEFLGENFALMSGTSMAAPHVAGLAALVKQKFPNFGPAAIGSALSTSASLYDNNGRSIMAQRSYPTIDLNLSPATPFDMGSGFVNATAALNPGLLFDSSYDDYMSFLCGINGSTPTVLNYTGQNCWTYNSTVYGPDLNLPSITIARLNQSRVVQRTIQNIAGNETYNVGWSAPYGTSMKVSPNHFSLGSGERQVLSVIFNATSNSSAASYGRIGLYGNQGHVVNIPVSVIFKIL* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03241 852 Gene3D - 725 849 - -
Lapu3g03241 852 SUPERFAMILY Subtilisin-like 160 712 IPR036852 GO:0004252|GO:0006508
Lapu3g03241 852 Gene3D - 400 568 - -
Lapu3g03241 852 Gene3D Peptidase S8/S53 domain 187 721 IPR036852 GO:0004252|GO:0006508
Lapu3g03241 852 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 113 846 IPR045051 -
Lapu3g03241 852 CDD Peptidases_S8_3 160 667 IPR034197 -
Lapu3g03241 852 PRINTS Subtilisin serine protease family (S8) signature 630 646 IPR015500 -
Lapu3g03241 852 PRINTS Subtilisin serine protease family (S8) signature 265 278 IPR015500 -
Lapu3g03241 852 PRINTS Subtilisin serine protease family (S8) signature 185 204 IPR015500 -
Lapu3g03241 852 Pfam Fibronectin type-III domain 754 847 IPR041469 -
Lapu3g03241 852 ProSiteProfiles Serine proteases, subtilase domain profile. 164 708 - -
Lapu3g03241 852 Pfam Peptidase inhibitor I9 45 160 IPR010259 -
Lapu3g03241 852 Pfam Subtilase family 185 670 IPR000209 GO:0006508|GO:0008236
Lapu3g03241 852 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 190 201 IPR023827 -
Lapu3g03241 852 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 35 158 IPR037045 -
Lapu3g03241 852 MobiDBLite consensus disorder prediction 67 88 - -
Lapu3g03241 852 MobiDBLite consensus disorder prediction 71 85 - -
Lapu3g03241 852 CDD PA_subtilisin_like 409 541 - -
Lapu3g03241 852 ProSitePatterns Serine proteases, subtilase family, serine active site. 631 641 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03241 Lapu-Chr3 55714951 55721442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03241 42 851 Subtilisin-like Serine Gene Family AT4G20430 69.118 0.0 1164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03241 - - gmx:100814065 1541.17