Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03235 ATGGACTTTTTCATGCAATCTTTGTTAATTACTGTGATCACCTTGATTGCATCTGTCTATGTTTTGCAGAAAAGAAGAAGAGGAAGTGGCACTAAAACCTTGCCTCCCGGTAGCTTTGGGTGGCCTCTGGTGGGTGAAACCTACCAATTTTTGTTCATCAAGACTCAATATTTCATTCAAGAGAGGGTCAAAAAGTACTCCTCAGAGATCTTCCACACAAACATACTAGGAGAGCCAACAGTGGTTCTTTATGGCCCTGGAGCAAACAAATTTGTCTCCACCAATGAGACAAAGCTTGTCAAAGTCTGGTACATGAAGACTCAGCGCAGGTTCTTCAATATTCCTGATCAAACACATGCACCAAAGCCAAAACCAAAACAAGAAGCTGCATCTGCTGCTTCAGTGAAGATCTTGAGGATTCTGAAACCTGAGGGAATAGCAAGGTACATGGGGAGCAAGATTGAATCGACCATGCATCAGCATTTCTTGACACACTGGGAAGGAAAAACAGAAGTGAAGGTGTACCCTTTGGTGAAGGCCTTTTCCCTCACACTTGTTTGTCAATTCTTCTTAGGCATTGATGAACCAAAATTGGCCGGTGAGTTTGAGAACTTGTTTTTTGGGATGTATTCTGTTCCTTTGAATTTCCCGGGCTCTACATACCGTAGGGCACTGAAGGCTTCAGCTGCAATAAGGAAAGAGATCCAATTTCTGATCAAAGAGAAGATTGATGCTTTGTCCAAGGGGCAAGTGTTGGATGACCTACTAGCACACGTAGTTGGTGCTGAGCAGGGTGGAAAATATGTGCCGAGAATTGAAATAAGCAACGTCATCATGGGGCTGATGAATTCCGGTCACATACCAATAGCTATTACTCTGGCTTTCATGATCAAACACATTGGGCAGAGACCTGATATCTACCAAAAAATCGTATCCGAGCATGCTGATGTTGCAAAATCCAAAGGATCTGGTGCAGCATTAGACTGGGACAGCATACAGAAACTGAAATACACATGGGCTGTTGCACAGGAGACTATGAGACACTATCCAACTGCACCAGGTGTATTCAGAGAGGTCATAACAGATATCACCTATGAAGGTTTTACTATTCCAAAGGGGTGGAAGATCTTTTGGTCACTTGTTGGGGCAAATAAGAATCCCACCTACTTTCCTGAACCTGAAAGTTTTGATCCCTCAAGGTTTGAAGGGAACATTCTTCCTGCTCCATACACTTGGATACCCTTTGGAGCTGGACCAAGATCTTGCCCTGGAAAAGACTACGCGCGGTTTGTGGTCCTCAATTTCATTCACATTCTCATAATCAAGTTCAAGTGGGAAGTTATACTTCCTGATGAGAGAGTTTCAGGTGCTTTAATACCTACCCCAGCAGAGGGAATTCCTATCCGTCTTCATCACCATTAA 1422 0.4346 MDFFMQSLLITVITLIASVYVLQKRRRGSGTKTLPPGSFGWPLVGETYQFLFIKTQYFIQERVKKYSSEIFHTNILGEPTVVLYGPGANKFVSTNETKLVKVWYMKTQRRFFNIPDQTHAPKPKPKQEAASAASVKILRILKPEGIARYMGSKIESTMHQHFLTHWEGKTEVKVYPLVKAFSLTLVCQFFLGIDEPKLAGEFENLFFGMYSVPLNFPGSTYRRALKASAAIRKEIQFLIKEKIDALSKGQVLDDLLAHVVGAEQGGKYVPRIEISNVIMGLMNSGHIPIAITLAFMIKHIGQRPDIYQKIVSEHADVAKSKGSGAALDWDSIQKLKYTWAVAQETMRHYPTAPGVFREVITDITYEGFTIPKGWKIFWSLVGANKNPTYFPEPESFDPSRFEGNILPAPYTWIPFGAGPRSCPGKDYARFVVLNFIHILIIKFKWEVILPDERVSGALIPTPAEGIPIRLHHH* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03235 473 CDD CYP90-like 62 472 - -
Lapu3g03235 473 Pfam Cytochrome P450 35 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 PRINTS E-class P450 group I signature 339 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 PRINTS P450 superfamily signature 302 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 PRINTS P450 superfamily signature 340 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 SUPERFAMILY Cytochrome P450 33 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 PANTHER CYTOCHROME P450 26 32 450 - -
Lapu3g03235 473 Gene3D Cytochrome P450 24 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03235 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03235 Lapu-Chr3 55639349 55641338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03235 33 376 Cytochrome P450 AT5G36110 33.333 5.61e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03235 K20667 - var:108321875 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03235 3 55639349 55641338 Lapu3g03235 3 55639349 55641338 ECH