Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03229 ATGGGTCTGGGAAGAGGCAGTGCAGTGGTGCTACTACTCTCACTCTGTTTCTTGGTGCTACACTCTGAGATGGCTCATGCTGCCACCTACGTAGTTGGAGGTACTGGGGGTTGGACCTTCAACACTGTTGGCTGGCCCAAGGGAAAACGCTTTAGGGCTGGTGACACACTTGTGTTCAATTATAACCCTTCGGCACATAATGTGGTGGCCGTGAACAGAGTTGGGTACAGTAGTTGCAAGACTCCAAAAGGGGCGAAAGTGTATCAGTCAGGGAAGGATCAGGTCAGACTAGCGAAGGGACAGAACTACTTCATCTGCAACTATGTGGGTCACTGCGAGTCTGGGATGAAAATTGCCATCAATGCAGTTTGA 372 0.5027 MGLGRGSAVVLLLSLCFLVLHSEMAHAATYVVGGTGGWTFNTVGWPKGKRFRAGDTLVFNYNPSAHNVVAVNRVGYSSCKTPKGAKVYQSGKDQVRLAKGQNYFICNYVGHCESGMKIAINAV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03229 123 SUPERFAMILY Cupredoxins 28 122 IPR008972 -
Lapu3g03229 123 Pfam Plastocyanin-like domain 38 116 IPR003245 GO:0009055
Lapu3g03229 123 Gene3D - 28 123 IPR008972 -
Lapu3g03229 123 PANTHER BLUE COPPER PROTEIN 26 121 IPR039391 GO:0009055
Lapu3g03229 123 FunFam basic blue protein-like 28 122 - -
Lapu3g03229 123 CDD Plantacyanin 28 122 IPR041844 -
Lapu3g03229 123 ProSiteProfiles Phytocyanin domain profile. 28 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03229 Lapu-Chr3 55594190 55595343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03229 9 123 Phytocyanin Superfamily AT1G17800 38.017 2.62e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03229 - - gmx:100499869 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03229 3 55594190 55595343 Lapu3g03229 3 55594190 55595343 ECH