Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu3g03213 | ATGGACTCCATTTTTGTTCTTTTCATCCTTTTGGTTGCATCAGAGCGAGGCTCAGCAGCACCCTCTCCCTCTCCTTCTCCCACCACTTCCCCTACCGACAGTTCTACATGCCCAGTGACCATGAATTATGTTCAAACAGTCCCTTGGAACATCTCTTCCTGCCATAACTTCCAACCCTTGTCTTCCCAATACCAAACAAGCACAAGTCCTTGCTGCCAAAATCTCCTATCTCTCTTTGGTGTAGCACTTGCACAAAACCTCAAGGAAAACTCTCTTTTCCAACTCCCCAACCTCCCTACTTCTATCTCTTGCCTCCAACACTTCCAATCCAATCTCACATCCCTCTCACTTTCCAACAACCTTGTCTCCTCCTGCTTTGGTCCACAGCAATTTGTCATCTCTCCCAACCTCTGTGCTCGTATTCAAAACATGGAAGATTGGCTCACCAGACTTGGTTCTACACCACAGCTCGACACTGCGTGTAAACCAGATCTCACTAATAAAAACCAATGCAACAAGTGCGTGGCTGAGGGGTACAAGGTGCAGCAGAGGCTTACTTCCATTGATGGTAATGAATCGCATTCTCAAGATTGCTTTTACTTCACAACACTTTACATGGCTGGAGTTGCTAATGAGTATGGCCCTGAGAGCAAAGGTTCTTTGTCTTGCATTTTGATTTTGTTGGTTAATTTACAAGTTGATTCAAGGGATGGCCATCGTGCTCTTATGCTTGGTTTATTTGTGGCTTCACTTGCAGTCCTGGTAATCGCGTTGTCAGGAATAGGGTTGTATTTTTGGTACACCAAGAGAAGAAGCGTCGAAAATTTGCTTGCCTATGCTGATCTACAGGAACAAAGTTTCAGGCTAAGGTTGAGACCAAATACAGTGTTAACTTGGTTTGAAATTGAGAGTCTTGTGAGGGCCACTGACAATTTTTCACCTCGGAACTTCATTGGCAGAGGTGGGTTTGGGATGGTTTACAAGGGCATTCTACCTGATGGCACAACGGTTTCGGTGAAAAGGCTTGAAGAATCCGATTCTCAAGGAGATGATTTGTTCTACAGTGAGGTTGAGATTGTTAGCAACTTGAAGCACCGGAATCTTGTGCCTCTAAGAGGGTGTTGTGTGGTTGATGAAGAGGATGAGAATCGCAATCTTGTGTACAGAAGAAGGTATCTAGTTCATGAATATATGCCAAATGGAAGCCTTGAAGACAATCTTTTTCCTACCAAATTAAACAATCAATATACAAAGAAATCCCTGACTTGGACTCAAAGAAAAAGCATAGTCTTGGATGTGGCAAATGCATTGGTCTATTTGCACTTTGGCGTTAAACCTGCAGTGTATCACAGAGATATCAAAGCCACCAATATACTACTTGATGCAGATATGAGGGCGAGGGTTGGAGATTTTGGGCTGGTCAAACGGAGCAGTGAAAGTAGGTCTCATCTAAATACAAGAGTAGCTGGAACTCGTGGATATGTAGCACCTGAATATGCACTCTATGGTCAGCTAACTGAGAAGACTGATGTCTACAGCTTTGGTGTGGTTGTTCTTGAGATAATGTGTGGAAGAAAAGCCCTTGAGTTGTCTCCATCAGGGACACCGGTTTTCTTGATCACAGATTGGGTTTGGTCATTGATGAAATCTGGAAACATAGGAGAGGCTTTGGATGCTTCTATGTTAGGAGATGAAAATTGTGCTAGAAACGTAATGGAGAGGTTTTTGCTGGTTGGAATTCTTTCTTCTCATGTATTGGTTGCTTCAAGGCCAACAATTTTGAATGCCTTGAAGATGTTAGAAGGGGATATTGAGGTCCCACCAATTCCAGATAGGCCACTGACGCATGGACACTATGTGTTGTACAATGGTGATTGCTCTGAGATGAGCTCAGGATGTGGGTTTGTGAGCTCATGA | 1917 | 0.4366 | MDSIFVLFILLVASERGSAAPSPSPSPTTSPTDSSTCPVTMNYVQTVPWNISSCHNFQPLSSQYQTSTSPCCQNLLSLFGVALAQNLKENSLFQLPNLPTSISCLQHFQSNLTSLSLSNNLVSSCFGPQQFVISPNLCARIQNMEDWLTRLGSTPQLDTACKPDLTNKNQCNKCVAEGYKVQQRLTSIDGNESHSQDCFYFTTLYMAGVANEYGPESKGSLSCILILLVNLQVDSRDGHRALMLGLFVASLAVLVIALSGIGLYFWYTKRRSVENLLAYADLQEQSFRLRLRPNTVLTWFEIESLVRATDNFSPRNFIGRGGFGMVYKGILPDGTTVSVKRLEESDSQGDDLFYSEVEIVSNLKHRNLVPLRGCCVVDEEDENRNLVYRRRYLVHEYMPNGSLEDNLFPTKLNNQYTKKSLTWTQRKSIVLDVANALVYLHFGVKPAVYHRDIKATNILLDADMRARVGDFGLVKRSSESRSHLNTRVAGTRGYVAPEYALYGQLTEKTDVYSFGVVVLEIMCGRKALELSPSGTPVFLITDWVWSLMKSGNIGEALDASMLGDENCARNVMERFLLVGILSSHVLVASRPTILNALKMLEGDIEVPPIPDRPLTHGHYVLYNGDCSEMSSGCGFVSS* | 639 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu3g03213 | 638 | SUPERFAMILY | Protein kinase-like (PK-like) | 291 | 600 | IPR011009 | - | |
Lapu3g03213 | 638 | MobiDBLite | consensus disorder prediction | 17 | 36 | - | - | |
Lapu3g03213 | 638 | FunFam | probable LRR receptor-like serine/threonine-protein kinase RKF3 | 398 | 608 | - | - | |
Lapu3g03213 | 638 | Gene3D | Phosphorylase Kinase; domain 1 | 276 | 389 | - | - | |
Lapu3g03213 | 638 | ProSiteProfiles | Protein kinase domain profile. | 312 | 587 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu3g03213 | 638 | FunFam | Receptor-like serine/threonine-protein kinase At4g25390 | 277 | 397 | - | - | |
Lapu3g03213 | 638 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 44 | 619 | - | - | |
Lapu3g03213 | 638 | Gene3D | Transferase(Phosphotransferase) domain 1 | 398 | 606 | - | - | |
Lapu3g03213 | 638 | SMART | serkin_6 | 312 | 587 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu3g03213 | 638 | MobiDBLite | consensus disorder prediction | 19 | 36 | - | - | |
Lapu3g03213 | 638 | Pfam | Protein kinase domain | 316 | 529 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu3g03213 | 638 | Pfam | SPARK | 33 | 199 | IPR043891 | - | |
Lapu3g03213 | 638 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 448 | 460 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu3g03213 | Lapu-Chr3 | 55476851 | 55481647 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu3g03213 | 34 | 618 | Receptor kinase-like Gene Family | AT1G11050 | 56.419 | 0.0 | 645 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RKF3 | Lapu3g03213 | Pkinase | 5.2e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu3g03213 | - | - | vra:106765729 | 1088.17 |