Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03213 ATGGACTCCATTTTTGTTCTTTTCATCCTTTTGGTTGCATCAGAGCGAGGCTCAGCAGCACCCTCTCCCTCTCCTTCTCCCACCACTTCCCCTACCGACAGTTCTACATGCCCAGTGACCATGAATTATGTTCAAACAGTCCCTTGGAACATCTCTTCCTGCCATAACTTCCAACCCTTGTCTTCCCAATACCAAACAAGCACAAGTCCTTGCTGCCAAAATCTCCTATCTCTCTTTGGTGTAGCACTTGCACAAAACCTCAAGGAAAACTCTCTTTTCCAACTCCCCAACCTCCCTACTTCTATCTCTTGCCTCCAACACTTCCAATCCAATCTCACATCCCTCTCACTTTCCAACAACCTTGTCTCCTCCTGCTTTGGTCCACAGCAATTTGTCATCTCTCCCAACCTCTGTGCTCGTATTCAAAACATGGAAGATTGGCTCACCAGACTTGGTTCTACACCACAGCTCGACACTGCGTGTAAACCAGATCTCACTAATAAAAACCAATGCAACAAGTGCGTGGCTGAGGGGTACAAGGTGCAGCAGAGGCTTACTTCCATTGATGGTAATGAATCGCATTCTCAAGATTGCTTTTACTTCACAACACTTTACATGGCTGGAGTTGCTAATGAGTATGGCCCTGAGAGCAAAGGTTCTTTGTCTTGCATTTTGATTTTGTTGGTTAATTTACAAGTTGATTCAAGGGATGGCCATCGTGCTCTTATGCTTGGTTTATTTGTGGCTTCACTTGCAGTCCTGGTAATCGCGTTGTCAGGAATAGGGTTGTATTTTTGGTACACCAAGAGAAGAAGCGTCGAAAATTTGCTTGCCTATGCTGATCTACAGGAACAAAGTTTCAGGCTAAGGTTGAGACCAAATACAGTGTTAACTTGGTTTGAAATTGAGAGTCTTGTGAGGGCCACTGACAATTTTTCACCTCGGAACTTCATTGGCAGAGGTGGGTTTGGGATGGTTTACAAGGGCATTCTACCTGATGGCACAACGGTTTCGGTGAAAAGGCTTGAAGAATCCGATTCTCAAGGAGATGATTTGTTCTACAGTGAGGTTGAGATTGTTAGCAACTTGAAGCACCGGAATCTTGTGCCTCTAAGAGGGTGTTGTGTGGTTGATGAAGAGGATGAGAATCGCAATCTTGTGTACAGAAGAAGGTATCTAGTTCATGAATATATGCCAAATGGAAGCCTTGAAGACAATCTTTTTCCTACCAAATTAAACAATCAATATACAAAGAAATCCCTGACTTGGACTCAAAGAAAAAGCATAGTCTTGGATGTGGCAAATGCATTGGTCTATTTGCACTTTGGCGTTAAACCTGCAGTGTATCACAGAGATATCAAAGCCACCAATATACTACTTGATGCAGATATGAGGGCGAGGGTTGGAGATTTTGGGCTGGTCAAACGGAGCAGTGAAAGTAGGTCTCATCTAAATACAAGAGTAGCTGGAACTCGTGGATATGTAGCACCTGAATATGCACTCTATGGTCAGCTAACTGAGAAGACTGATGTCTACAGCTTTGGTGTGGTTGTTCTTGAGATAATGTGTGGAAGAAAAGCCCTTGAGTTGTCTCCATCAGGGACACCGGTTTTCTTGATCACAGATTGGGTTTGGTCATTGATGAAATCTGGAAACATAGGAGAGGCTTTGGATGCTTCTATGTTAGGAGATGAAAATTGTGCTAGAAACGTAATGGAGAGGTTTTTGCTGGTTGGAATTCTTTCTTCTCATGTATTGGTTGCTTCAAGGCCAACAATTTTGAATGCCTTGAAGATGTTAGAAGGGGATATTGAGGTCCCACCAATTCCAGATAGGCCACTGACGCATGGACACTATGTGTTGTACAATGGTGATTGCTCTGAGATGAGCTCAGGATGTGGGTTTGTGAGCTCATGA 1917 0.4366 MDSIFVLFILLVASERGSAAPSPSPSPTTSPTDSSTCPVTMNYVQTVPWNISSCHNFQPLSSQYQTSTSPCCQNLLSLFGVALAQNLKENSLFQLPNLPTSISCLQHFQSNLTSLSLSNNLVSSCFGPQQFVISPNLCARIQNMEDWLTRLGSTPQLDTACKPDLTNKNQCNKCVAEGYKVQQRLTSIDGNESHSQDCFYFTTLYMAGVANEYGPESKGSLSCILILLVNLQVDSRDGHRALMLGLFVASLAVLVIALSGIGLYFWYTKRRSVENLLAYADLQEQSFRLRLRPNTVLTWFEIESLVRATDNFSPRNFIGRGGFGMVYKGILPDGTTVSVKRLEESDSQGDDLFYSEVEIVSNLKHRNLVPLRGCCVVDEEDENRNLVYRRRYLVHEYMPNGSLEDNLFPTKLNNQYTKKSLTWTQRKSIVLDVANALVYLHFGVKPAVYHRDIKATNILLDADMRARVGDFGLVKRSSESRSHLNTRVAGTRGYVAPEYALYGQLTEKTDVYSFGVVVLEIMCGRKALELSPSGTPVFLITDWVWSLMKSGNIGEALDASMLGDENCARNVMERFLLVGILSSHVLVASRPTILNALKMLEGDIEVPPIPDRPLTHGHYVLYNGDCSEMSSGCGFVSS* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03213 638 SUPERFAMILY Protein kinase-like (PK-like) 291 600 IPR011009 -
Lapu3g03213 638 MobiDBLite consensus disorder prediction 17 36 - -
Lapu3g03213 638 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 398 608 - -
Lapu3g03213 638 Gene3D Phosphorylase Kinase; domain 1 276 389 - -
Lapu3g03213 638 ProSiteProfiles Protein kinase domain profile. 312 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03213 638 FunFam Receptor-like serine/threonine-protein kinase At4g25390 277 397 - -
Lapu3g03213 638 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 44 619 - -
Lapu3g03213 638 Gene3D Transferase(Phosphotransferase) domain 1 398 606 - -
Lapu3g03213 638 SMART serkin_6 312 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03213 638 MobiDBLite consensus disorder prediction 19 36 - -
Lapu3g03213 638 Pfam Protein kinase domain 316 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03213 638 Pfam SPARK 33 199 IPR043891 -
Lapu3g03213 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03213 Lapu-Chr3 55476851 55481647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03213 34 618 Receptor kinase-like Gene Family AT1G11050 56.419 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lapu3g03213 Pkinase 5.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03213 - - vra:106765729 1088.17