Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03211 ATGGAGAAGTACGAGGTGGTGGAAGAGAACATAGGAGATGGAAGATTCGCAAGGGTGAAACTTATGCGTCACAAAGAAACCGAAAACCTCGTTGCTGTCAAATTCATCCCACGGAACATGATTAACGAGATGGTGGTAAGGGAAATCATAAACCATAGATGTCTTCGTCATCCTAATATTGTTCAGTTCAAAGAGGTGGCTTTGACTCCAACACATCTTGCAATAGTTATGGAGTATGCAGCTGGTGGAGAGTTGTTTTACCATGTTCTTCGCGCAGAAAGAATGAGAGAAGATCAGGCTCGATATTTCTTCCAGCAGTTGATTGCAGGAGTTGGTTATTGCCACGACATGGAAATATGTCATCGAGACTTGAAGTTGGAGAATACCTTATTGGATGGAAGTCCTGCAAATCGTCTTAAAATTTGTGATTTTGGCTATTCTAAGTCATGTCTACTTCATTCGAGGACTCGTTCAAGGGTAGGAACTCCAGCCTATATTGCACCGGAGATCCTTTGTGGGAAAGATTATGATGGAAAGTTGGCAGATATATGGTCCTGTGGAGTAATACTTTATACAATGCTTGTAGGAACATTGCCATTTGAAGACAAAAATGACCGTCAAAATCTCCGGAAAACCGTTCAGCGAGTTTCGGCTGTTCAATACGAGTTCCCCTATAATATTTTATCTCCAGACAGTAAAAATCTGATATCTCGTATTTTTGTGGCAAATCCAGCAAAGAGAATCACCATAAAGGAAATCAAGTCACATCCATGGTTTTTAAGGAACTTGCCTGAGGAGTTAAGAGAAGGTGCTTACTACTACAATGAAGAAAATACAAAATATTGTCTTCAAAGTATAGAAGAGATAATGAACATTGTCAACGAAGCCAAAACCAAACCTGTAGCTTCGAGGCCAAAACCACACCTGTAG 930 0.4043 MEKYEVVEENIGDGRFARVKLMRHKETENLVAVKFIPRNMINEMVVREIINHRCLRHPNIVQFKEVALTPTHLAIVMEYAAGGELFYHVLRAERMREDQARYFFQQLIAGVGYCHDMEICHRDLKLENTLLDGSPANRLKICDFGYSKSCLLHSRTRSRVGTPAYIAPEILCGKDYDGKLADIWSCGVILYTMLVGTLPFEDKNDRQNLRKTVQRVSAVQYEFPYNILSPDSKNLISRIFVANPAKRITIKEIKSHPWFLRNLPEELREGAYYYNEENTKYCLQSIEEIMNIVNEAKTKPVASRPKPHL* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03211 309 SUPERFAMILY Protein kinase-like (PK-like) 7 276 IPR011009 -
Lapu3g03211 309 Pfam Protein kinase domain 7 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03211 309 Gene3D Transferase(Phosphotransferase) domain 1 1 306 - -
Lapu3g03211 309 SMART serkin_6 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03211 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lapu3g03211 309 ProSiteProfiles Protein kinase domain profile. 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g03211 309 FunFam Serine/threonine-protein kinase SRK2A 80 267 - -
Lapu3g03211 309 PANTHER SERINE/THREONINE KINASE 2 280 - -
Lapu3g03211 309 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03211 Lapu-Chr3 55463092 55467898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03211 11 263 CBL-interacting serine-threonine protein kinases AT5G25110 43.019 1.52e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lapu3g03211 Pkinase 1.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03211 K14498 - gmx:100787825 465.307