Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03205 ATGGGTAAGACCCCCTTTTCCTTCCGCCGCTCCGTCTCTCGCCGCCGCCCCAAGAAGGCCACCGCGCCGCCGCCTCCGCGGTCCCCGCCCCAGCCTCCATATGTGGCCGGGATCACCGCCTCCCCGGACGCCGCCGCAAACAACCGCCTTGTTGCCGCGGCTGGCGCCAGCGCGTTGACCAAGGCGAAGAAGAAGACCGGCGGCGCACGGCTCTGGATGAGGTTCGACCGGTCCGGCCGGTCCGAGCTCGTGGAGTGGGAGAAGAACGCGATCATCCGCCACGCCGCGATTCCCGCTCGAGACCTGAGAATCCTGGGGCCCGTCTTCTCCCACTCCTCGAACATCCTCGCTAGAGAGAAAGCAATGGTGGTTAATTTGGAGTTTATAAAGGCTATAGTAACTGCTGAAGAAGTGTTGTTGCTTGATCCTCTTCGGCAGGAGGTTCTTCCCTTTGTTGAGCAACTCAGGCAACAGCTTCCGGGCAAGAGTCCACCGAAACTTCTGGGCGCCGTGGAGGAGCAGGAAGGTGAAATGCAGGGTTCTAATGGCAGGCAATGGTTGCCTACGCCGGAGACGGTTGAAGGTTTGCAGTCTGAGCTTCCGTTTGAGTTTCAAGTTCTGGAGATTGCTTTGGAGGCTGTATGTACTTATCTTGACTCCAGTGTGGCAGACCTTGAGAGAGGTGCTTACCCTGTGCTGGATGAATTGGCTAGGAATGTTAGTACCAAGAATCTTGAACATGTGAGGAGTTTGAAGAGTAATCTCACGCGGTTGCTGGCACGAGTGCAGAAGGTACGAGATGAAATTGAACATTTGTTAGATGACAACGAAGATATGGCACAACTATATTTGACCAGGAAGTGGCTGCTGAATCAACAATTTGAGGAGGCTCAATTGGGTGCCACAACCTCAAATAACCTTCCTAATTCTGCCCGTGCTGTTCGAAGACTTGGTTCTAATAGAAGTGAAAGTCTTGTGACCAGCCATTATGAGGATGATAATGATGTGGAGGACTTGGAAATGTTGCTTGATGCATATTTCATGCAGTTAGATGGAACTCGTAACAAGATATTATCTGTCAGGGAGTATATCGACGACACTGAAGACTATGTCAATATCCAACTCGATAACCACCGAAATGAACTTATTCAGCTGCAGTTGACATTGACTATTGCATCATTTGCTATTGCTATTGATACTTTGATTGCTGGAGCATTTGGTATGAACATTCCTTGTAAATTATATAATACAGAAGGACTATTTTGGCCCTTTGTTTGGATCACGTCTGCAGCTTGTGTATTTCTTTTCTTGCTTATTTTAGCATATGCAAGATGGAAAAAGTTGCTGGGATCATAA 1356 0.4971 MGKTPFSFRRSVSRRRPKKATAPPPPRSPPQPPYVAGITASPDAAANNRLVAAAGASALTKAKKKTGGARLWMRFDRSGRSELVEWEKNAIIRHAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPGKSPPKLLGAVEEQEGEMQGSNGRQWLPTPETVEGLQSELPFEFQVLEIALEAVCTYLDSSVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLLNQQFEEAQLGATTSNNLPNSARAVRRLGSNRSESLVTSHYEDDNDVEDLEMLLDAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIDTLIAGAFGMNIPCKLYNTEGLFWPFVWITSAACVFLFLLILAYARWKKLLGS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03205 451 CDD Mrs2_Mfm1p-like 72 448 IPR039204 -
Lapu3g03205 451 Gene3D Magnesium transport protein CorA, transmembrane region 389 449 - -
Lapu3g03205 451 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 50 449 IPR039204 -
Lapu3g03205 451 MobiDBLite consensus disorder prediction 1 34 - -
Lapu3g03205 451 FunFam Magnesium transporter MRS2-1 60 143 - -
Lapu3g03205 451 Pfam CorA-like Mg2+ transporter protein 328 444 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lapu3g03205 451 Coils Coil 248 282 - -
Lapu3g03205 451 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 387 438 IPR045863 -
Lapu3g03205 451 Gene3D Magnesium transport protein CorA, transmembrane region 146 382 - -
Lapu3g03205 451 Gene3D - 57 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03205 Lapu-Chr3 55417593 55420870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03205 1 451 MRS2 Gene Family AT3G58970 65.639 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03205 K16075 - gmx:100812561 763.066