Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03204 ATGGCAAATTCAAAGGGCTCGTCGGGTTTCAGAAATTTTATGTATCCTGGAAAGCACGCTCTACTTCCTCCTAAAAGTCCGTTTCCTAGTGTTTCGCAAACGTACGCTGATTATGTCCCAAATCCCGCTGTTGGTTTAAAGACGGGTAACAGACCCAGAGAGGGAAACCCACACCACCAACGTACATCATCTGAAAGCCTTGTTATAGAGGAGCAGCCTTCTTGGCTTGATGATCTCCTTAATGAGCCAGAGACACCCATCCGAAGAGGTGGACATCGGCGTTCATCAAGTGATTCTTTTGCTTACATAGACACGGTTAATGCATCCAACATCAATTATGCTGATCCGGACGAGTATAAATATAAGAATCTGATGTCTGTTCCGTCTTGGTCATCTCAAGACTTTGACCGCAGCAAAGATGCTCGTCATCTACCTTCTTATGCAGAAATGAACTTAGCTAAACAGAAAAATAGGTCATGGGACTCTTTTTCAAATGCCATGACAAATCCTGTTGGTGTTCCCTCTGGCAAAGACAGTTCAGCTTTTCAGAGTTCAGGATTGCCATGCACACCACATGAAGCAGATGGGATTCCACCGACTGCAGCTGAAAAGCAGGATTCAGTAGAATCTGGATTACAGGATGCAAAGTCTTTTTCTGAAAAAAAGGACAATTCACATGCGAAGACATCTGCCTCTGAAACTGATACAAAACGTGCTAAACAGCAATTTGCTCAGCGTTCACGGGTCCGGAAACTTCAATACATAGCTGAGCTGGAAAGAAATGTTCAAGCTTTACAGGCAGAAGGGTCTGAAGTCTCAGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAATATAGCACAAGAGCAGCTTATCAAATATTTGGAGCATGAAGTACTGGAAAGAGAGATTGGAAGATTACGTGCGTTGTATCAGCAGCAGCAGCAGCCACCGGCGCAGCCACAACAGCAACCATCTGGTAGTCACAGACGCTCGAACAGCAGGGACCTCGAATCTCAGTTTGCAAACCTCTCGCTAAAACACAAGGATACCAATTCAGGGCAAGACCCTGCTCTCAGAATTTAG 1128 0.4459 MANSKGSSGFRNFMYPGKHALLPPKSPFPSVSQTYADYVPNPAVGLKTGNRPREGNPHHQRTSSESLVIEEQPSWLDDLLNEPETPIRRGGHRRSSSDSFAYIDTVNASNINYADPDEYKYKNLMSVPSWSSQDFDRSKDARHLPSYAEMNLAKQKNRSWDSFSNAMTNPVGVPSGKDSSAFQSSGLPCTPHEADGIPPTAAEKQDSVESGLQDAKSFSEKKDNSHAKTSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLENIAQEQLIKYLEHEVLEREIGRLRALYQQQQQPPAQPQQQPSGSHRRSNSRDLESQFANLSLKHKDTNSGQDPALRI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03204 375 Gene3D - 236 290 - -
Lapu3g03204 375 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Lapu3g03204 375 MobiDBLite consensus disorder prediction 215 242 - -
Lapu3g03204 375 MobiDBLite consensus disorder prediction 42 69 - -
Lapu3g03204 375 MobiDBLite consensus disorder prediction 326 344 - -
Lapu3g03204 375 Coils Coil 248 303 - -
Lapu3g03204 375 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
Lapu3g03204 375 MobiDBLite consensus disorder prediction 153 244 - -
Lapu3g03204 375 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Lapu3g03204 375 MobiDBLite consensus disorder prediction 326 375 - -
Lapu3g03204 375 MobiDBLite consensus disorder prediction 153 187 - -
Lapu3g03204 375 MobiDBLite consensus disorder prediction 351 366 - -
Lapu3g03204 375 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 360 IPR044797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03204 Lapu-Chr3 55405086 55410865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03204 71 307 bZIP Transcription Factor Family AT2G42380 30.894 1.31e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03204 - - gmx:100813098 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03204 3 55405086 55410865 Lapu3g03204 3 55405086 55410865 ECH