Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03193 ATGGAGGTGACCAATCTTGTAGTCTTGCCAGCAGTTTTGGCATTCTTTGTACTTTGTATACATTTCATCACTAGAATGGTCAGACTCAGAAACCCGAATCTTCCTCCTGGAAGATTGGGGTGGCCTATTGTTGGAGAAACCTTTGAGTTTATGCATGCAATGCTTGAGGGCAACGTGTTAAGGTTCGTACAAGAGAGAGTGGAGAAATATGACTCTGGGGTGTTCAAGACTTCGATGTTTGGAGATCCTGTTGTTGTGTTTTGCGGGCCAGCTGGGAACAAGTTCCTATTCAGCAATGAGAACAAGAATGTTCAAGTGTGGTGGCCTAGTTCGGTGAAGAAGCTGTTAAGGTTGTCCCTTGTTAACAAGGTCGGTGACGAGGCAAAGATGATGAGAAAGTTGCTCATGAACTTTCTTAGTGCAGAAACGCTCAAAAATTACTTGCCAAAAATGGATAGAATTGCTCAGCACCATATAGACACGTATTGGAAAGGAAAGGAGCAGGTTTTTGTCTATCAAACTGTAAAGCTATACACGTTTGAATTGGCTTGTTGCTTATTTTTAAGCATTGAAGACTCTGATCAAATATCAAAGCTTTCGTTAAAATTTAATGCATTTCTCAAAGGGATCATTGGCTTCTCCCTCAACATTCCGGGAACAAGGTTTCATCGTGCAATGAAAGCTGCAGATGAAATAAGGAAAGAAATTAAAATGATTTTAGAAAAAAGGAAACTGGATTTGAAGGAGAGGAGGGCATCACCTACTCAAGACCTTCTATCACACATGCTTGTTACGTCTGACCCAAGTGGAAGGTTTATGACAGAAATGGAGATTCTTGATAACATACTTCTTCTACTTTTTGCAGGCCATGATACTTCTAGATCAGTTTTATCATCGGTGATGAAGTATCTTGGACAGTTGCCTCAAGTTTATGAACAAGTCTTGAAAGAACAACTTGAAATTATTCAAGAGAAAGAGACAGGGCAGTTGTTGCAATGGGAAGATGTTCAGAAAATGAAATACTCTTGGAATGTTGTATCGGAAGTCATGAGGCTGTCTCCACCTGTCAGTGGTGCTTATAGAGAAGCTACAAGGGATTTCACCTATGCTAATTATAACATCCCTAAAGGCTGGAAGTTGCATTGGATCACTGTTTCATCACACAAGGATCCAACACTCTTCTCGAATCCCCAAACTTTTGATGCTTCAAGGTTTGAAGGAGCAGGGCCTACACCCTTTTCGTACATTCCATTTGGAGGTGGCCCCCGAATGTGTTTGGGGCAAGAATTTGCTAGACTAGAGATACTTGTGTTCATGCACAATATCGTGAAACGGTTCAAGTGGGAATTGGTGATTCCTGATGAAAAGTTCAAGTATGATCCCATGCTAGAACCAGTAAAAGGACTTGCAATTCGACTTCATCCTTCTAATTTCTATGAAGTTTTTTGCTACTTTGATTAG 1461 0.4066 MEVTNLVVLPAVLAFFVLCIHFITRMVRLRNPNLPPGRLGWPIVGETFEFMHAMLEGNVLRFVQERVEKYDSGVFKTSMFGDPVVVFCGPAGNKFLFSNENKNVQVWWPSSVKKLLRLSLVNKVGDEAKMMRKLLMNFLSAETLKNYLPKMDRIAQHHIDTYWKGKEQVFVYQTVKLYTFELACCLFLSIEDSDQISKLSLKFNAFLKGIIGFSLNIPGTRFHRAMKAADEIRKEIKMILEKRKLDLKERRASPTQDLLSHMLVTSDPSGRFMTEMEILDNILLLLFAGHDTSRSVLSSVMKYLGQLPQVYEQVLKEQLEIIQEKETGQLLQWEDVQKMKYSWNVVSEVMRLSPPVSGAYREATRDFTYANYNIPKGWKLHWITVSSHKDPTLFSNPQTFDASRFEGAGPTPFSYIPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWELVIPDEKFKYDPMLEPVKGLAIRLHPSNFYEVFCYFD* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03193 486 Gene3D Cytochrome P450 23 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 PANTHER CYTOCHROME P450 26 32 461 - -
Lapu3g03193 486 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 FunFam Taxadiene 5-alpha hydroxylase 26 476 - -
Lapu3g03193 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506|GO:0016705
Lapu3g03193 486 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 Pfam Cytochrome P450 35 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 SUPERFAMILY Cytochrome P450 27 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g03193 486 CDD CYP90-like 66 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03193 Lapu-Chr3 55271878 55275660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g03193 32 380 Cytochrome P450 AT5G36110 44.318 7.81e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03193 - - gmx:100808690 845.884